Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00844 ATGTACCTGGGGAGTGACACAATGGCAAAGACCATTGAGCTTCTACGGTGGTACTGGCGACCTTTCTCTTTCTCTTTCTCTCTTTCGATTTCGCTTAAAAATCCGTCGAACTTACCCTTTTCATATAAGGCAGTTTTTGTGACTGACATTGCGGAAATAAGGGAAGATCATTTCGAAATTGGAGAGGATGAAGCTATGGCTGTTTACTCTCCATATTTTCTAAGGAGCATGGTATCAAGACCTGATTGTATGGAAAACTTGATGAGGGTTATAAGAAATATCAAACCAGTTATAATGATAGTCCTTGAAGTAGAAGCAAACCATAACTCGCCCTCTTTTGTGAACGGCTTCATTGAAGCATTGTTCTTCTACTCAGCATATTTTGATTGCCTTGAAACCTGCATAAAACATGAGATTGAGTGTAGAATGACAATAGAAGCAGTATTATCTGAAGGGATAAGAGACATTGTTGCTATGGAAGGAAGGGAAAGGACAGTTAGAAATGTGAAGATAGATTTTTGGAGAAGGTTCTTTGCAAGGGAGAAGAGAGAAAGCGGTGTAAAACAAAAGAGGCAGAGGGAAGTGAAGAAGACTTTGGAGTTTGCTGAGAAATGGAAATAA 621 0.3929 MYLGSDTMAKTIELLRWYWRPFSFSFSLSISLKNPSNLPFSYKAVFVTDIAEIREDHFEIGEDEAMAVYSPYFLRSMVSRPDCMENLMRVIRNIKPVIMIVLEVEANHNSPSFVNGFIEALFFYSAYFDCLETCIKHEIECRMTIEAVLSEGIRDIVAMEGRERTVRNVKIDFWRRFFAREKRESGVKQKRQREVKKTLEFAEKWK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00844 206 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 184 IPR005202 -
Gma01g00844 206 Pfam GRAS domain family 37 180 IPR005202 -
Gma01g00844 206 ProSiteProfiles GRAS family profile. 1 206 IPR005202 -
Gma01g00844 206 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 37 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00844 Gma-Chr1 26684073 26685299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00844 40 179 GRAS Transcription Factor Family AT2G01570 33.099 2.31e-20 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma01g00844 GRAS 1.1e-30 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00844 - - gmx:102663581 284.263