Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00843 ATGGTGGTTGCTGGCAGGATAAAGCAGCTAACATCACTGCTTGCAAATCACAATGCTTTTGAGTTACTTGCTAAATATGGGACAACTCATCTCATTTTCAATGACGATATACATGGGACTGCATCTGTTGTTGTAGCTGGAGTTGTAGCAGCCCTAAAACTCATTGGTGGTACATTGCCTGAGCACACATTCCTCTTCCTTGGTGCTGGAGAAGTGCTGGAATTTCTTCCTGAACTGCTTGACACTTTGAAGGACGAGGGGTACTCTTTGACCAAATCTGAAGAGGCAGTGTTTCTTCCATGCTTAGTAGAGAAGTATTTAGAGGGAAAAGAGCTTGAGGAATTGGGAACATATGAAGAGGGAAATGAAACAACACCTACAAAGTCAACCCCTCACATGTTTCGCAAAACTCTTACAACCTCAGATACCAACACTCATGGGGGGTTCTTTGTCCCTCGCAGAGCTGTTGAAGACTGTTTTCCTCGTTTGGTGTGA 495 0.4404 MVVAGRIKQLTSLLANHNAFELLAKYGTTHLIFNDDIHGTASVVVAGVVAALKLIGGTLPEHTFLFLGAGEVLEFLPELLDTLKDEGYSLTKSEEAVFLPCLVEKYLEGKELEELGTYEEGNETTPTKSTPHMFRKTLTTSDTNTHGGFFVPRRAVEDCFPRLV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00843 164 PRINTS Malic enzyme signature 8 26 IPR001891 GO:0004470|GO:0004471
Gma01g00843 164 PRINTS Malic enzyme signature 33 49 IPR001891 GO:0004470|GO:0004471
Gma01g00843 164 PRINTS Malic enzyme signature 64 80 IPR001891 GO:0004470|GO:0004471
Gma01g00843 164 ProSitePatterns Malic enzymes signature. 33 49 IPR015884 GO:0004471
Gma01g00843 164 SUPERFAMILY DNA-binding pseudobarrel domain 125 163 IPR015300 -
Gma01g00843 164 PANTHER MALIC ENZYME-RELATED 14 79 - -
Gma01g00843 164 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 72 IPR036291 -
Gma01g00843 164 Pfam Malic enzyme, NAD binding domain 37 98 IPR012302 GO:0051287
Gma01g00843 164 Gene3D - 35 93 - -
Gma01g00843 164 Gene3D - 113 164 IPR015300 -
Gma01g00843 164 PANTHER MALIC ENZYME 14 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00843 Gma-Chr1 26669947 26676622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00843 108 163 B3 DNA Binding Superfamily AT5G60450 67.857 1.01e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00843 K00029 - gsj:114404881 197.593