Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00776 ATGAACCTGGCGAGGGAAGAGTATGAGCTCCAGCTAGGTTTGCTCAACAAGTTTCGTGAAATCACTACCCTTTGTGACATTCAAGCATGTGCTATCATTTATACTTCGGATGTACCAGAGGATAAGGTTTGGCCATCTGATCAGGGAGTGAATAGTGTGATTTCTAGGTTTATGGGAGTTTTTGAATTGGAAATGAGCAAGAGAATGTTATGTCCAGAGAACCACTTAAAAAGAAACATAAACAAAGCCCAGGGGCAGCTGAAGAAATTGAGGAATGAAAACAAGAAGAAGGAGATTGGCCTTTTCATGTGTCAATACTTTGTTGGTAGGAACAACCTTGACAATGCAAACATTATTGATTAG 363 0.3994 MNLAREEYELQLGLLNKFREITTLCDIQACAIIYTSDVPEDKVWPSDQGVNSVISRFMGVFELEMSKRMLCPENHLKRNINKAQGQLKKLRNENKKKEIGLFMCQYFVGRNNLDNANIID 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00776 120 Gene3D - 10 99 IPR036879 GO:0003677|GO:0046983
Gma01g00776 120 PANTHER MADS BOX PROTEIN 13 115 - -
Gma01g00776 120 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 13 115 - -
Gma01g00776 120 Coils Coil 73 100 - -
Gma01g00776 120 SUPERFAMILY SRF-like 13 78 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00776 Gma-Chr1 21453422 21457921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00776 13 103 Type I MADS-box Gene Family AT1G31640 46.154 3.22e-20 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Gma01g00776 SRF-TF 0.00015 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00776 - - gmx:100783663 160.614