Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00759 ATGTCCAAGAACCGCGGATTCAACCTCAGGAGGCGCCTCATCCGGGTCTCGAAATGGATCTTCAGGAAGATACGGACGCGGGCTCCACGCGAGTACCATTGCCTGGGTGACTCTCCTCCGTCACCCATGGTGAAGCTCCTTACGTGGGGCCGCAAGCTGACAGCGGGTGCCAAGTCCCGCTTGAAAGTGGCGTCCGGATCCGGTTATGCCCAATTAGGAACCGATCCGGACCCGAGTGTGCCGAAGGGGCACCTGGCCGTGTACGTAGGGCAGAAGGACGGCGAGTTGCACCGTGTTCTGGTGCCGGTAATATACTTCAACCACCCTTTGTTTGGAGAATTGCTGAAGCAGGCGGAGGAGGAGTTCGGGTTCCACCACGAAGGGGGAATCACCATCCCGTGCCGGTTCACCGAGTTTGAACGGGTGAAGACCCGAATTGCATCCGGATCTCGCAGAGGCACCCGTCCGAAAAGATTGGCCTGGCGCTGA 489 0.593 MSKNRGFNLRRRLIRVSKWIFRKIRTRAPREYHCLGDSPPSPMVKLLTWGRKLTAGAKSRLKVASGSGYAQLGTDPDPSVPKGHLAVYVGQKDGELHRVLVPVIYFNHPLFGELLKQAEEEFGFHHEGGITIPCRFTEFERVKTRIASGSRRGTRPKRLAWR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00759 162 Pfam Auxin responsive protein 60 143 IPR003676 GO:0009733
Gma01g00759 162 PANTHER SMALL AUXIN-UP RNA-RELATED 1 154 - -
Gma01g00759 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 154 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00759 Gma-Chr1 20653971 20654459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00759 75 154 Calmodulin-binding Proteins AT3G43120 45.000 5.67e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00759 K14488 - gmx:100783436 332.798