Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00741 ATGAAGTACTATTTTGAGCAATTTGGTGAGATCTTGGAGGCTGTTGTCATCTCTAACAAAGCCATTGGAAGATCTAAAGGCTATGGATATGTTACTTTTCGTGAACCAGAAGCTGCCATGAGAGCTTGTATGGATCCTGCTCCTGTAATCGACTGTAGGAGAGCTAACTACAACCTTGCTTCTTTGGGTGTCCAGAGATCTAGGCCTTCAACCGCAAAACATGTTTTCATAAGAACAAATTACAATGGGAACATAAACATGCTTCAAAGAGAAGTGAGCACAAAGAGCACGTACGCAGAAGCACAAAGTTACAATGAAGACATGAAGCTTACCTCGAACCCAACACCGACAATGGCAGCGAGACTCAACTATTCAATGGCAGCGACAATGGGTCTCAGGTCACCACGAGTTCCCCAATCCTTGCACCAGAAACCAAAAAAGGTCCTTAGGTTAACCAAAGGTTCCAGAAATAGACCTAGCTATTCAATAGAACAACACAGTTTGAGTAGTGCTGAACTTGATGAACTATCAAGTGAAGTTGAAAATATGATCCAGTTTTCTCAAAGCTCTCAGTTCATTGGAAGCTCATAA 591 0.4196 MKYYFEQFGEILEAVVISNKAIGRSKGYGYVTFREPEAAMRACMDPAPVIDCRRANYNLASLGVQRSRPSTAKHVFIRTNYNGNINMLQREVSTKSTYAEAQSYNEDMKLTSNPTPTMAARLNYSMAATMGLRSPRVPQSLHQKPKKVLRLTKGSRNRPSYSIEQHSLSSAELDELSSEVENMIQFSQSSQFIGSS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00741 196 Gene3D - 1 58 IPR012677 -
Gma01g00741 196 PANTHER BOULE-RELATED 1 85 IPR037366 GO:0003729
Gma01g00741 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 42 IPR000504 GO:0003723
Gma01g00741 196 PANTHER OS01G0876800 PROTEIN 1 85 - -
Gma01g00741 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 69 IPR000504 GO:0003723
Gma01g00741 196 SUPERFAMILY RNA-binding domain, RBD 2 72 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00741 Gma-Chr1 18736572 18738744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00741 1 61 C2H2 Transcription Factor Family AT2G19380 40.984 5.01e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00741 - - gmx:100803774 230.335