Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00737 ATGTTGGATTATGAGTGGGGGAACCCATCAACGATCATACTCGCCGGAAATGAAGGTGGCACCACCGGCAAACCCGACCAGACTCGCCGACAAATCTTCGATCACAACTTCACCATGCTATCTAACAACAACATTCTACAAGGTGTCTCCCATCAGTATCATCACCACTTCAACCCACCACAACCGCATCAGCACCACGCCTTCTTCGACCCACGCGCCTTCCAAAGCGCGTTCACCACTTCCTTCTCTCCACCACCACGTTCCATGTTGTCGCTTAACTCAATCCCACCTTTGGCCACCCCCCACTGTGGGCTTGGATTTCTGCTCATGCACAAGCCTGATGATGTCATGAACTTCGAGGGCTCTGCTCACAGACTTGGGCATGGGCCTGGACTTGGGCTTAACCTCGGAGGCCGCACCTACTTTGATCCGTTCAATGACAACACGGTCAACCGACTCTACCGAACTAAGACGGTAGAGTCGGTTACGACGTTGTCGTCGAATTTGCCACGGTGTCAGGCGGAAGGATGCAATGCGGACCTTTCCGACGCGAAGCACTACCACCGCCGCCACAAGGTGTGCGAGTATCACTCCAAGGCCGCCACTGTCGTTGCTGCCGGGTTGACTCAGCGATTCTGCCAACAGTGTAGCAGGTTATTCCACCTTCTTTCAGAATTTGACAATGGGAAACGGAGCTGCAGGAAGAGACTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAGCAGATTGCTCAAGAAATTCACAAATCTCAGCATTCTTTGGACAATGTTGCAAGGTCCTTACCTGAATCTGGAGCTCAATCTTCGTCGTCGTCGGGGAAGGTGGCAGTACGTGTCACCCCCTGA 867 0.5271 MLDYEWGNPSTIILAGNEGGTTGKPDQTRRQIFDHNFTMLSNNNILQGVSHQYHHHFNPPQPHQHHAFFDPRAFQSAFTTSFSPPPRSMLSLNSIPPLATPHCGLGFLLMHKPDDVMNFEGSAHRLGHGPGLGLNLGGRTYFDPFNDNTVNRLYRTKTVESVTTLSSNLPRCQAEGCNADLSDAKHYHRRHKVCEYHSKAATVVAAGLTQRFCQQCSRLFHLLSEFDNGKRSCRKRLADHNRRRRKTQQIAQEIHKSQHSLDNVARSLPESGAQSSSSSGKVAVRVTP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00737 288 Pfam SBP domain 172 246 IPR004333 GO:0003677
Gma01g00737 288 MobiDBLite consensus disorder prediction 239 288 - -
Gma01g00737 288 SUPERFAMILY SBT domain 170 248 IPR036893 GO:0003677|GO:0005634
Gma01g00737 288 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 128 279 - -
Gma01g00737 288 ProSiteProfiles Zinc finger SBP-type profile. 169 247 IPR004333 GO:0003677
Gma01g00737 288 Gene3D - 163 234 IPR036893 GO:0003677|GO:0005634
Gma01g00737 288 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 128 279 IPR044817 GO:0003677
Gma01g00737 288 MobiDBLite consensus disorder prediction 253 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00737 Gma-Chr1 17801667 17804476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00737 1 219 SBP-box Gene Family AT1G02065 40.244 4.97e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma01g00737 SBP 2.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00737 - - gmx:100808178 537.724