Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00736 ATGGAGTTCGGAGGGAACATGTTCTGCCTTAACAACAGAGACCAAAATGGAAACACTAACAACAACGGTAACACTTTCGCTTGGGATTCATGGGAAACCCCCGCCAATAGTAGTAATAATAACAACAACAACAACACCAGTTCCAGACTGGTCAACGCTTTCCACCTTCCAGCCGCCTCGAGGGTCGCGGAGGCGGATGGATCCGTCCCCGCGACCCGTCATGAAGCGGCAGGGCTGGCCAGCGCGCTCATGTTCCTCCCTCAGAACGGCGGCGGTATGCGTCACCGCCAGCAGCAGCAGCATCCGTACGGTGGGGATGGGTCCCACGTGCACCCGGATCCACACCTCATGTGCTTGAAGCTTGGGAAGAGGCATTACTTTGAGGACACTAGCGGCAGTGGGAGTGGGAGTGTTGCTGCTGCTGCTACTTTGGGTGGAGGGTTGGTGTTGGGGGATAAGAGAGGGAAAGGTTATTCCTCCGGTGGTGGTGCATCGGTGAAGGCGGCGGGGTTAACGGCGGTGACGGTGCCGAGGTGTCAGGTAGAGGGGTGCCACTTGGCGCTGCTAAACGCGAAGGATTACCACCGGAGGCACAAGGTGTGTGAGATGCACTCAAAGGCTCCCAAAGTTGTGGTCTTAGGCATGGAACAGAGGTTCTGCCAGCAGTGTAGCAGGTTTCACGTGGTGTCAGAGTTTGATAATTCAAAGAGGAGTTGTAGGAGGAGACTAGCTGGTCACAACGAGAGAAGAAGAAAGAGCTCCCATGATTCTGTTGCAAGGAATTCTTCAAAAGGAGGGTGTGCTCTCTCTCTTCTGTCATCAAGAAGTGATTCTTGGCTTTCTCCTTCTGATCTCTCCATAAGATGCAGTGCCGCATTGCGTGAATTGATAGCCGAAAACCGGGCAGCCATCATGGCCAGACAATTTGTTTCAGATAGAGATTGGCATAATCATCACCATGCAGTGGAAGACTTCAAGGAGATCCAACCTGAGTCCAATTACTTCCCACAACAAATGTTTCCCCAGACACAATGA 1035 0.5285 MEFGGNMFCLNNRDQNGNTNNNGNTFAWDSWETPANSSNNNNNNNTSSRLVNAFHLPAASRVAEADGSVPATRHEAAGLASALMFLPQNGGGMRHRQQQQHPYGGDGSHVHPDPHLMCLKLGKRHYFEDTSGSGSGSVAAAATLGGGLVLGDKRGKGYSSGGGASVKAAGLTAVTVPRCQVEGCHLALLNAKDYHRRHKVCEMHSKAPKVVVLGMEQRFCQQCSRFHVVSEFDNSKRSCRRRLAGHNERRRKSSHDSVARNSSKGGCALSLLSSRSDSWLSPSDLSIRCSAALRELIAENRAAIMARQFVSDRDWHNHHHAVEDFKEIQPESNYFPQQMFPQTQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00736 344 MobiDBLite consensus disorder prediction 91 110 - -
Gma01g00736 344 MobiDBLite consensus disorder prediction 13 47 - -
Gma01g00736 344 ProSiteProfiles Zinc finger SBP-type profile. 176 253 IPR004333 GO:0003677
Gma01g00736 344 Gene3D - 172 240 IPR036893 GO:0003677|GO:0005634
Gma01g00736 344 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 44 344 IPR044817 GO:0003677
Gma01g00736 344 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 44 344 - -
Gma01g00736 344 SUPERFAMILY SBT domain 177 258 IPR036893 GO:0003677|GO:0005634
Gma01g00736 344 MobiDBLite consensus disorder prediction 243 263 - -
Gma01g00736 344 Pfam SBP domain 179 252 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00736 Gma-Chr1 17689913 17696264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00736 117 252 SBP-box Gene Family AT1G27370 52.555 5.66e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma01g00736 SBP 1.8e-31 No_clan