Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00677 ATGATGCCTTCTGACTCCACCTTTAATGTAGCCTACAACGCCTTCAACACCTTCAGCGAAACTAGATTTGGCAAGCACGTCCCCCATGCTTTCTTTGTCGACCTTGAACCCATCGTCATCGATGAGGTCTGCTACGACACCTACTGTCAACTCTTCCACCCCGAACAACTCATCTCTGGTAAGGAAGACGCCGCCAACAACTTCGCCAGCGACCACTACACCGTTGGCAAAGAGATCATAGATCTGTGCTTGGATCGCATCTGCAAGCTCGTCGATAATTGCACCGGCCTACAAGGCTTCCTCATCTTCAACACCGTCGACGGTGGCAAGTACCCTAGGATCCACTTCATGCTTTCATCCTATGCTATGACTGATCATAAGCTCAAAAAAGTATTGGACAAGATAATTTGCTACTCTGTGTTTGACGTCTATCAGATGTTTGATGTGTTGCATCAACTGAAAATTAATGTGACTTTCAAGGAGGCTAAGGCTGCCAAGAAGGCTTGTGAGGATTCAACAAATCTAATTATCAATGGTCGTCGAGCGAATTGCAATCTTGCTTTCCTAGGTGCTCATCGCCCAAAGTCTTCTTCAAATGTTTCACCACCTCCACCGCAACCACAAGGGGGATCCAATGGTGGAATAGTGAAGAATGTTAACAATGCATTAGGTCCACCACCAGCCATTAATCATGTGCAGCCATATCATTATCCAGTGAGGACAACTGCTCTGCCATTCCATAATCACACTCTTCCTTTCTATGGTTCTTTGGGACAAGGTCTTCTTACTAGCACTTTTGTTGGAGAAATAATGTTCGCCATTGTTGTTGCAACCCTTGGATTGGTTCTTTTCGGATTGCTGATTGGTAATATGCAGAAGATAATGCCTAAAGACAAGGACCACGATCTGCTTCCTATTTAG 921 0.4517 MMPSDSTFNVAYNAFNTFSETRFGKHVPHAFFVDLEPIVIDEVCYDTYCQLFHPEQLISGKEDAANNFASDHYTVGKEIIDLCLDRICKLVDNCTGLQGFLIFNTVDGGKYPRIHFMLSSYAMTDHKLKKVLDKIICYSVFDVYQMFDVLHQLKINVTFKEAKAAKKACEDSTNLIINGRRANCNLAFLGAHRPKSSSNVSPPPPQPQGGSNGGIVKNVNNALGPPPAINHVQPYHYPVRTTALPFHNHTLPFYGSLGQGLLTSTFVGEIMFAIVVATLGLVLFGLLIGNMQKIMPKDKDHDLLPI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00677 306 Gene3D Tubulin/FtsZ, GTPase domain 1 163 IPR036525 -
Gma01g00677 306 SUPERFAMILY Tubulin nucleotide-binding domain-like 14 110 IPR036525 -
Gma01g00677 306 MobiDBLite consensus disorder prediction 195 217 - -
Gma01g00677 306 PRINTS Tubulin signature 73 97 IPR000217 GO:0005874|GO:0007017
Gma01g00677 306 PRINTS Tubulin signature 99 117 IPR000217 GO:0005874|GO:0007017
Gma01g00677 306 PRINTS Tubulin signature 18 37 IPR000217 GO:0005874|GO:0007017
Gma01g00677 306 PRINTS Tubulin signature 60 71 IPR000217 GO:0005874|GO:0007017
Gma01g00677 306 PRINTS Alpha-tubulin signature 53 66 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma01g00677 306 PRINTS Alpha-tubulin signature 85 93 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma01g00677 306 PRINTS Alpha-tubulin signature 227 242 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gma01g00677 306 PANTHER TUBULIN 10 109 IPR000217 GO:0005874|GO:0007017
Gma01g00677 306 SMART Tubulin_4 15 180 IPR003008 GO:0005525
Gma01g00677 306 PANTHER TUBULIN ALPHA CHAIN 10 109 - -
Gma01g00677 306 Pfam Tubulin/FtsZ family, GTPase domain 16 109 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00677 Gma-Chr1 12744062 12746934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00677 255 292 Ion Channels AT2G28260 76.316 1.06e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00677 K07374 - gmx:102670475 261.922