Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00675 ATGGAAGACGTGATAACAGAAGCAGCACCCCCATCAAGGTTCCTGGAAGAAGACCTAAACATCTTCACACCCCCATCCCCACCTCTCCCCACACCCTTCCTCATCTTCCCACACAACAAACTACCCCTCAAACCCTCTCTTCTCATCATCGCCCTCTCCCCCTCCTCCcTCGCCCTCTTCAACCAAACCCTAACCCTAACCCTAACCCCTCTCGCCTCCCTCATCCTCCCAGAACTCCCCCTCTCCCTCCCCGACCACAACGCTTCCATCCTCCCCCTCTCCCCCGACACCCTCCTCGCCGTCGTGCCATTCCCCGTCCCTCCCCACCGCGCCCACGCCGTCGCCCGCACCCTCCTCTCGATCCGGCCCTACTCCGTCCTCGTCCTCGACTCCCTCGACCCCACCAACTTCCGCGGCAAGCTCTCCTCCGACGAGGCCGTGGCGTTCAAGCTCGAGACCTCCGCCGAGAGAAAAATGACCTCCTCCGAGAAGCTCTTGGGGGAAGAATTGGATTACTACCCTTCCGGGAGCGTTGTGGACGGGCTGGGTGCCGCGATCCTCGCGCGGTGCCAGGTGATGAACGTTAGGGCGAGCTTGTGCTTCTCGTGGCCTCGGTTTGATATGTCTGTGGTGGCGTTGATTAAGGGCTTGCTTCGGCGGGGCGTGCTTCGGGGGTTCGAGTTTGGTTTGAGTGATGACGGGGTTTTGAAAATTGGGAAGGGTAGGGATAGGGTTTTGCATTCTGATGACCCTTATCTAACACTGGATTACTATGCATCAAGTTGCCCCACCGTGTTTGACATTGTTAGGAAAGAAATGGAATGTGCAGTGCTTTCTGATCCCCGCAATGCAGCCATGATAGTTCGGCTACACTTCCATGACTGCTTTGTTCAGGGCTGCGATGGATCAGTTTTGCTTGATGACACAATCACACTTAAAGGTGAGAAAAACGCCGCTACCAACATCCACTCTTTAAAAGGCTTGGGAATTGTTGATAAGATCAAGAACATAGTTGAATCAGAGTGCCCTGGAATTGTTTCTTGCGCTGATATTCTCACTATTGCAGCCAGAGATGCTGTTATTCTGGTAGGTGGACCTTACTGGGATGTTCCTGTGGGAAGGAAGGATTCTGTCACTGCAAATTTTGATCTTGCCAACACCAATCTTGCCACTCCAGATGAGAGCCTTCTGTCTATCATTGCCAAGTTTCTTTACCAAGGACTATCTGTCACGGATATGGTAGCCCTTGCAGGAGCCCACACCATTGGCATGGCACAGTGTAAGAATTTCCGGTCAAGAATTTACGGAGACTTTGAATCAACTTCAATGAAAAATCCAATCTCTGAGAGTCACCTCAGCAACTTAAAATCTGTTTGTCCACCTATGGGGGGAGGAGACAATAACATAACAGCAATGGACTACATGACACCTAATCTCTTTGACAATTCTTTCTACCAATTACTACTAAATGGGGAGGGACTTCTCAACTCAGACCAAGAAATGTACTCAAGTGTGTTTGGAATTGAAACTAGACAGCTTGTGAAGAAGTATGCAGCAGACCCTCTTGCTTTTTTCCGACAATTCTCGGAGTCAATGGTGAAAATGGGAAATATCACAAACTCAGAAAGCTTCTTCACAGGGGAAGTTAGGAAGAACTGCAGATTTGTGAACACATAG 1677 0.5063 MEDVITEAAPPSRFLEEDLNIFTPPSPPLPTPFLIFPHNKLPLKPSLLIIALSPSSLALFNQTLTLTLTPLASLILPELPLSLPDHNASILPLSPDTLLAVVPFPVPPHRAHAVARTLLSIRPYSVLVLDSLDPTNFRGKLSSDEAVAFKLETSAERKMTSSEKLLGEELDYYPSGSVVDGLGAAILARCQVMNVRASLCFSWPRFDMSVVALIKGLLRRGVLRGFEFGLSDDGVLKIGKGRDRVLHSDDPYLTLDYYASSCPTVFDIVRKEMECAVLSDPRNAAMIVRLHFHDCFVQGCDGSVLLDDTITLKGEKNAATNIHSLKGLGIVDKIKNIVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTANFDLANTNLATPDESLLSIIAKFLYQGLSVTDMVALAGAHTIGMAQCKNFRSRIYGDFESTSMKNPISESHLSNLKSVCPPMGGGDNNITAMDYMTPNLFDNSFYQLLLNGEGLLNSDQEMYSSVFGIETRQLVKKYAADPLAFFRQFSESMVKMGNITNSESFFTGEVRKNCRFVNT 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00675 558 PANTHER PEROXIDASE 11 246 556 - -
Gma01g00675 558 ProSitePatterns Peroxidases proximal heme-ligand signature. 412 422 IPR019793 -
Gma01g00675 558 Gene3D - 257 557 - -
Gma01g00675 558 Gene3D Peroxidase, domain 2 390 535 - -
Gma01g00675 558 ProSiteProfiles Plant heme peroxidase family profile. 252 557 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 411 423 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 471 486 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 286 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 345 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 262 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 364 379 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 326 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 487 504 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Plant peroxidase signature 530 543 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 SUPERFAMILY Heme-dependent peroxidases 253 557 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 Pfam Peroxidase 269 520 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Haem peroxidase superfamily signature 346 363 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Haem peroxidase superfamily signature 364 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Haem peroxidase superfamily signature 473 488 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Haem peroxidase superfamily signature 284 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 PRINTS Haem peroxidase superfamily signature 412 427 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00675 558 CDD secretory_peroxidase 253 556 IPR033905 GO:0004601|GO:0042744
Gma01g00675 558 ProSitePatterns Peroxidases active site signature. 284 295 IPR019794 GO:0004601
Gma01g00675 558 PANTHER PEROXIDASE 72-RELATED 246 556 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00675 Gma-Chr1 12282334 12288815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00675 253 558 Peroxidase AT1G68850 73.941 1.13e-172 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00675 K00430 - gmx:100783236 626.706