Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00659 ATGGGTGACAAAGAAAAGTTTGAGTTGGATAGAAACGAGGATCCTATGAGTTATTCTAGTGGAATGCACTCGGATTGGAGATTTGGGGGTGCAAATATTGCAAGTTCTTCTGTAGCTATGGTTGGCCTGGGGAATTCTATGAATGTCAGCAGAGGGGATTTGATTGGTTCTTCTTCATGTTCCTCTGCTTCAATGGTGGACTCATTTGGTCCAAACTACTGGGAAAACCCCACCTGTTCCCAAAACTTGGGATTTTGTGACATTAATGTCCACAACAATGGGGGTTCTTCAAGCACAGTTGCAATCAGAAAAGATGGTTTTGGATTTGGAAGAGCTGGTCAGGATCATCATGAAACACTTGAAATGGGTTGGAACCCTGCTAATTCTATATTATCAAATGGACCAGGGATGTTTCCCCACACTTTGTCTCAGTTTCCAACTGATTCTGGATTCATTGAGAGAGCTGCAAGATTCTCATGCTTCAGTGGAGGGAATTTTAGTGATATGGTAAACTCATATGGGATTGCTCAATCCATGGGGCTGTATGGAGCAAGAGATGCTATTGCAGGCCATGGGATGAAATCAGTAACTGGAGGGCAATCTCAGGGAGGTGATATGAATGTAGTTGAAGCTACAAAGGATGTGTCTCCATCTGTTGAACATCTTGTTGCTGCTAAAGGAAGCCCTCTCAAGAGTGATAGAAGAAGTGAAGGCCATGTTATATCCCAAGATGAAGGGAAGCAATCTCTTGTTAGGCCCGCTAATGAGTCTGATAGAGCTGAATCTAGTGATGATGGTGGTGGTCAGGATGACTCCCCAATGTTGGAAGGTACTAGTGGGGAACCTTCTAGCAAAGGACTAAACACAAAGAAAAGGAAAAGAAGTGGACAGGATGGTGATAATGATAAAGCCAATGGAGCTCAAGAACTACCTAGTGAAGGTGCAGAGGACAACTATGAGAATCAACAGAAGGGAGACCACCAACCAACTTCAACAGCCAAGGCTTCTGGGAAGAATGCCAAACTGGGGTCTCAAGCTTCTGATCCACCCAAGGAGGAATACATACATGTTAGAGCTCGCCGGGGTCAAGCAACAAACAGCCATAGCCTTGCAGAGAGAGTGAGGAGGGAAAAGATAAGTGAGAGAATGAAGTTTCTTCAAGATCTTGTACCTGGATGCAGCAAGGTCACTGGCAAGGCAGTAATGCTAGATGAAATCATCAACTATGTACAGTCACTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGGCTGGATTTTAATATTGAAGGACTTCTTGCTAAAGATATTCTTCAACAACGGCCTGGTCCTTCATCCGCACTAGGGTTTCCTCTAGATATGTCCATGGCTTTTCCTCCATTACATCCACCTCAACCTGGGCTGATTCATCCAGTAATTCCCAACATGGCAAACTCATCTGATATCCTTCAAAGAACCATCCATCCACAGTTAGCTCCCTTGAATGGTGGATTAAAGGAACCAAATCAGCTGCCTGATGTATGGGAGGATGAACTTCACAATGTTGTACAGATGAGCTTTGCAACAACTGCTCCCCTTACTAGCCAAGATTTTGATGGTACTGGGCCAGCAAGTCAGATGAAAGTTGAACTTTGA 1653 0.4398 MGDKEKFELDRNEDPMSYSSGMHSDWRFGGANIASSSVAMVGLGNSMNVSRGDLIGSSSCSSASMVDSFGPNYWENPTCSQNLGFCDINVHNNGGSSSTVAIRKDGFGFGRAGQDHHETLEMGWNPANSILSNGPGMFPHTLSQFPTDSGFIERAARFSCFSGGNFSDMVNSYGIAQSMGLYGARDAIAGHGMKSVTGGQSQGGDMNVVEATKDVSPSVEHLVAAKGSPLKSDRRSEGHVISQDEGKQSLVRPANESDRAESSDDGGGQDDSPMLEGTSGEPSSKGLNTKKRKRSGQDGDNDKANGAQELPSEGAEDNYENQQKGDHQPTSTAKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPGPSSALGFPLDMSMAFPPLHPPQPGLIHPVIPNMANSSDILQRTIHPQLAPLNGGLKEPNQLPDVWEDELHNVVQMSFATTAPLTSQDFDGTGPASQMKVEL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00659 550 MobiDBLite consensus disorder prediction 286 300 - -
Gma01g00659 550 MobiDBLite consensus disorder prediction 227 242 - -
Gma01g00659 550 MobiDBLite consensus disorder prediction 251 266 - -
Gma01g00659 550 MobiDBLite consensus disorder prediction 224 350 - -
Gma01g00659 550 CDD bHLH_AtBPE_like 353 438 - -
Gma01g00659 550 SMART finulus 369 419 IPR011598 GO:0046983
Gma01g00659 550 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 363 413 IPR011598 GO:0046983
Gma01g00659 550 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 361 432 IPR036638 GO:0046983
Gma01g00659 550 MobiDBLite consensus disorder prediction 324 343 - -
Gma01g00659 550 PANTHER BHLH TRANSCRIPTION FACTOR 10 549 - -
Gma01g00659 550 MobiDBLite consensus disorder prediction 1 21 - -
Gma01g00659 550 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 549 IPR024097 GO:0006355
Gma01g00659 550 Gene3D - 360 433 IPR036638 GO:0046983
Gma01g00659 550 Pfam Helix-loop-helix DNA-binding domain 366 414 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00659 Gma-Chr1 11746696 11750058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00659 56 526 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 47.401 5.26e-120 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma01g00659 HLH 7.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00659 - - gmx:100797720 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00659 01 11746696 11750058 Gma01g00659 01 11746696 11750058 ECH