Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00656 ATGGCCTCCAAAACTATATGCACTACCATTCAGGTGACTCTCATAGTCGCTTTTCTAACAACCCAGGTTGTTTTCTCTGATGACAATGTGCCAATTCCTGCTAACAAGGAACAATTGGGCACATGGTTTAGTACTAATGTAGGACCTTTAGATCAAAGAAAAAGCACTATAGACCCCGCATTGGTGGCTGCTGAAGAAGGTGCTAAGGTTGTGAAGGTAATGCAAGATGGAAGTGGGGAATTCAAGACCATCACTGATGCCATTAACAGTGTACCTAATGGGAACACCAAGCGTGTAATTGTGTTTATTGGAGCTGGAAATTATAATGAGAAAATCAAAATTGAGAGGACAAAGCCTTTCGTCACATTGTATGGGGTACCAGAGAAAATGCCAAACTTGACATTTGGGGGAACCGCACAACAATATGGCACTGTTGATAGTGCTACATTGATTGTTGAATCAGATTATTTTGTGGCAGCTAACATCATGATCTCGAACACTGCACCGAGACCTGATCCAAAAACGCCAGGAGGTCAAGCAGTGGCATTGCGAATTTCAGGTGACAAAGCAGCATTTTACAATTGCAAGATGTTTGGATTCCAGGACACAATTTGTGATGATAGGAATAAACATTTTTTCAAAGACTGCTTAATTCAAGGCACCATGGATTATATTTTTGGAAGTGGGAAGTCACTATATATGAGTACCGAACTAAGAACGCTTGGCGACAATGGGATTACTGTTATAGTGGCACAAGCAAGAAAAAGTGAGACAGAGGACAATGCCTACTCATTTGTACATTGTGATGTTACTGGAACTGGTACTGGGACTTTCTTGGGCAGAGCATGGATGTCTCATCCTAGAGTGGTCTTTGCATACAGCACCATGAGTGGTATTGTGAATAAATTAGGGTGGAGTAACAACAATCACCCCGAACATGACAAAACTGTTCGTTTTGGAGAGTACCAGAACACGGGACCTGGTGCAGACCCCAAAGGGCGTGCTCCTATAACTAAGCAACTAAGTGAAACGGAGGTCAAACCTTACATAACACTTGCGATGATTGAAGGCTCCAAATGGCTACTTCCTCCTCCAACTCCCAAAGTCTAA 1110 0.4252 MASKTICTTIQVTLIVAFLTTQVVFSDDNVPIPANKEQLGTWFSTNVGPLDQRKSTIDPALVAAEEGAKVVKVMQDGSGEFKTITDAINSVPNGNTKRVIVFIGAGNYNEKIKIERTKPFVTLYGVPEKMPNLTFGGTAQQYGTVDSATLIVESDYFVAANIMISNTAPRPDPKTPGGQAVALRISGDKAAFYNCKMFGFQDTICDDRNKHFFKDCLIQGTMDYIFGSGKSLYMSTELRTLGDNGITVIVAQARKSETEDNAYSFVHCDVTGTGTGTFLGRAWMSHPRVVFAYSTMSGIVNKLGWSNNNHPEHDKTVRFGEYQNTGPGADPKGRAPITKQLSETEVKPYITLAMIEGSKWLLPPPTPKV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00656 369 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
Gma01g00656 369 Gene3D - 65 364 IPR012334 -
Gma01g00656 369 SUPERFAMILY Pectin lyase-like 68 363 IPR011050 -
Gma01g00656 369 Pfam Pectinesterase 71 356 IPR000070 GO:0030599|GO:0042545
Gma01g00656 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00656 Gma-Chr1 11572861 11574395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00656 9 365 Carbohydrate Esterase AT1G69940 57.423 2.36e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00656 K01051 - gmx:100786427 745.347