Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00618 ATGCTGAAGTCAATGGTGGTGATCGAGGACCTAGAACGATTCCTCGCGAACAAAATGATGAGAACAAGCGCATCAGGGATATTGAACTTCATGGACAGGCTTTTAATCTGGTTCAGGGTTATTAGAAGATCTTTGTCGTCCAATGAATTGCCATCATTGTTCTATGTTACACTTACAAGAGAGCAATATATTTATTTCTGTAGACTGGGAAACGTGGTTTTGGAATTGTGGTGGCTAAAGATATCAAGAAACTTCTACTTATGTGAAATCAACCGAGATATGGTGATAGATGCCACATATAAGGGAAACAAATCAAGATACACCAATCATAGTTGTTGTCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTAGTGACATACAAAAGGATATTTATGCCTTTGGAAAGTTTTGGAGATGTTGGTCTCTCAGGAATTATGCTAGCATGACTGGCTGGTTATTCTATGTTTCTAACTACATAGTAGGTTTGCTCCATTTGGTGCATATCAAGATTGCCATTGAGGTGTTGCTGAGTGCAAGCGTAAGTTGGGTGTCCGACCTACCAAGCCTAAACTTTCTTTAG 612 0.3905 MLKSMVVIEDLERFLANKMMRTSASGILNFMDRLLIWFRVIRRSLSSNELPSLFYVTLTREQYIYFCRLGNVVLELWWLKISRNFYLCEINRDMVIDATYKGNKSRYTNHSCCPNTEMQKWIIDGETRIGIFATSDIQKDIYAFGKFWRCWSLRNYASMTGWLFYVSNYIVGLLHLVHIKIAIEVLLSASVSWVSDLPSLNFL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00618 203 Pfam SET domain 92 139 IPR001214 GO:0005515
Gma01g00618 203 Gene3D SET domain 55 141 IPR046341 -
Gma01g00618 203 ProSiteProfiles SET domain profile. 37 148 IPR001214 GO:0005515
Gma01g00618 203 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 82 139 - -
Gma01g00618 203 PANTHER SET DOMAIN PROTEINS 82 139 - -
Gma01g00618 203 SUPERFAMILY SET domain 77 139 IPR046341 -
Gma01g00618 203 SMART set_7 33 147 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00618 Gma-Chr1 10069669 10071203 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma01g00618 SET 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00618 - - gmx:100808183 121.709