Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00599 ATGGTTCCCAAGACGTCACGAGAGGGACCAAGGCCACCTCGCTGTCAATGCCTCCAAGACCAGATCCATCGCGATGACGTGCTCGTGCTGAGCTTGCACCGTGCTGCGAGATCCTGCAAGACCCCTACTACTTTGACACAAAAGCAAAGTTTTTTGTTCATTTATCATCTTCTGACTCGAGAAGTGCTACTCTTGAAGTTTGTAGATTATGGTCGCATGGCTGAAATCCTGGTACAAAGGGCAGGATCTCCAGATGAATTTACTAGGCTAACAACTATCACATGGGTTGATGAAGTTGAAGTCGTGATTGACCCAAAAGATATTGAACTGACAACAACACATTCTGGGGGTGCTGGAGGCCAGAATGTTAATAAGGTTGAAACAACCATTGATCTCTTCCATAAACCAACGGTATTCCGCATCTTTTCAATTGCTCCGAGCAAAACTCCTACCCTAGAAAAAAGGTTCCAAGAAAGATTAAGGGCTTCTTTATTGCAATGGTGCTATACCAGCTATGGAGAGGTTTTAAGTTCCTGGATGCACTTTTGTGCCGTGCGTTTATTTGCTAAGAGCATTCTGAGATATGGTCCGCCACCATCTTTCTTGGTAATGCACACTAACAACTTGCTGTCTGAGTTGGCTAGAAGAGAGACAAGAGCAATGATCAAGCTAGACCCAGATATTGATGTCTACATGAAGGCTATTATTACTTGCAAAAAGATTGGGCCAAAGAAACCTGTCGTGTGTCAAAATGGTGAATTAAAATTCCATGCACATTTTGCAGATCCTGGTGCAAGTTCTTATCTAGCTGTGGTGTTGATGCACGAAGGATTAGCCCATATCCTCCTTGTCGTTAGAAGGACCCTTGACCACAAGTGA 879 0.4403 MVPKTSREGPRPPRCQCLQDQIHRDDVLVLSLHRAARSCKTPTTLTQKQSFLFIYHLLTREVLLLKFVDYGRMAEILVQRAGSPDEFTRLTTITWVDEVEVVIDPKDIELTTTHSGGAGGQNVNKVETTIDLFHKPTVFRIFSIAPSKTPTLEKRFQERLRASLLQWCYTSYGEVLSSWMHFCAVRLFAKSILRYGPPPSFLVMHTNNLLSELARRETRAMIKLDPDIDVYMKAIITCKKIGPKKPVVCQNGELKFHAHFADPGASSYLAVVLMHEGLAHILLVVRRTLDHK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00599 292 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 156 204 - -
Gma01g00599 292 SUPERFAMILY Release factor 93 141 IPR045853 -
Gma01g00599 292 Gene3D - 96 166 - -
Gma01g00599 292 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 156 204 IPR004907 GO:0033180|GO:0046961|GO:1902600
Gma01g00599 292 SUPERFAMILY Vacuolar ATP synthase subunit C 157 204 IPR036132 GO:0015078|GO:0033180|GO:1902600
Gma01g00599 292 Pfam RF-1 domain 97 138 IPR000352 GO:0003747|GO:0006415
Gma01g00599 292 Pfam V-ATPase subunit C 157 205 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00599 Gma-Chr1 9458667 9463413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00599 157 202 Primary Pumps ATPases(2) AT1G12840 82.609 8.42e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00599 K02148 - gsj:114385932 102.834