Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00591 ATGAACCACGAAGACAAACTCACCATGGACCTGGTTCCACCATCTGAACACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTCCTCGCGGTTGGTATCCCATGCAAGAGGCTGTTAGACACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCCTTTCTGAGCACCAGACCCCCAAGTTCTCAAAACCAAAGCATTGATCATACCACCCTAAGTCTGCAGCAGGGGTTTTACAGTAATGCCAAAAAGGGGCAAGCATCATCTTCATCTTCCTCACCAACAACATCCAACGAGTCAGTGTCCCCAAAAGCAGCATCATTTGTTGTGAAACCACCTGAGAAAAAGCACCGTCTCCCTTCTGCTTACAACCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGCTGCGAACCCTGAGATCCCACATCGAGAAGCTTTCAGTGCTGCAGCGAAAAATTGGGCTAGGTTCATTCCAAATTCACCAACCAGTTCAGTTTCTGCAACTAAAGTTAACGCTGATTGA 528 0.4773 MNHEDKLTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPSSQNQSIDHTTLSLQQGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPTSSVSATKVNAD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00591 175 MobiDBLite consensus disorder prediction 82 114 - -
Gma01g00591 175 Pfam YABBY protein 14 158 IPR006780 GO:0007275
Gma01g00591 175 PANTHER PROTEIN CRABS CLAW 7 171 - -
Gma01g00591 175 SUPERFAMILY HMG-box 102 156 IPR036910 -
Gma01g00591 175 PANTHER PROTEIN YABBY 6-RELATED 7 171 IPR006780 GO:0007275
Gma01g00591 175 CDD HMGB-UBF_HMG-box 119 155 - -
Gma01g00591 175 Gene3D High mobility group box domain 92 162 IPR036910 -
Gma01g00591 175 MobiDBLite consensus disorder prediction 82 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00591 Gma-Chr1 9220956 9222885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00591 1 169 C2C2-YABBY Transcription Factor Family AT1G69180 62.791 2.11e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Gma01g00591 YABBY 5.4e-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00591 K25796 - gmx:100795791 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00591 01 9220956 9222885 Gma01g00591 01 9220956 9222885 ECH