Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00568 CAGGGGATTTCGGTGTTGCTGCACAGCTTACAAGGACTATGTCAAAACGCAATACGTTCATTGGAACTCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCTATTGAAATGGCTGAGGGTGTTCCACCAAGATCATCAGTACATCCAATGAGGGTTTTATTCATGATATCAATCGAACCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCTAAGTGCCTAACAAAAGAATTGCGTCTCCGCCCTACTGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAGTGGAAAAGTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCAATGGCTTCGCAGGTGCAAGCTCTTCCAGTTACATCAGAAGATCAGGAGTTAGATTCAAAACTAAATGATGAATATGGAGATACTGTGCCATCCAGACCTCATAACATCGGTGTTGAGGGGGCTGCTGATCTCTCTTCACATGGCACTACAAGGAAGCTACATAAAGTGGAAGATGTAGACATGAGTGAAGGCAACTTTGGCACTGTTATAATCCATGGAGATGAATTACATAAGACCACACAAGATGCAGATTCTGCAGTTTCTGTATCTGCTCTGACCAGTGGCACAAGAGGCAGATTGACTGACTCTGGGATTGAGAGTCAGAAAGTTGGTATTATGAACACTGCCTCTTTTAGAGGATATAGTGCTACTACCAATACCATTCAATCGTCTTTACCTTATGTTAGTAATTCAGCTGAGCAGAGCCTCAAAACCAAAGGTACTCATCGAGCACAAGCTGGAATTGGTGGTGATATAAGCAATAGCATATTCAAGAATGAAACAGTCAGCCATAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCCGGTAATACAGTGCCCATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCGCTTCTGTCAGACAATGTACTTGGTGGCATACAACAGGATACTGGTGGAACTGGAACAGTGGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGGGCAGGAGAGGACTAAATGAGCAGATGCCTTTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTATGAAGATATGCCGCTGCAGGAGCTGCAAGCGACCCAGGAGCAGCGGACTATCCAAAATCTATCTGACACCCTTCGAACCATTCTTCGGTTGTAG 1346 0.4309 GDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKELRLRPTASEMLKHKFFEKWKSGSAAMLPKLEKARQIRASMASQVQALPVTSEDQELDSKLNDEYGDTVPSRPHNIGVEGAADLSSHGTTRKLHKVEDVDMSEGNFGTVIIHGDELHKTTQDADSAVSVSALTSGTRGRLTDSGIESQKVGIMNTASFRGYSATTNTIQSSLPYVSNSAEQSLKTKGTHRAQAGIGGDISNSIFKNETVSHKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGIQQDTGGTGTVEALQELFSGDGQSKKGRRGLNEQMPFPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00568 447 SMART serkin_6 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00568 447 Pfam Protein kinase domain 2 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00568 447 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00568 447 SUPERFAMILY Protein kinase-like (PK-like) 1 120 IPR011009 -
Gma01g00568 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 1 437 - -
Gma01g00568 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 1 437 - -
Gma01g00568 447 Gene3D Transferase(Phosphotransferase) domain 1 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00568 Gma-Chr1 8640504 8665436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00568 1 447 MAP Kinase Kinase Kinase Kinase AT1G69220 62.473 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Gma01g00568 Pkinase 2.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00568 - - gmx:100784666 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00568 01 8640504 8665436 Gma01g00568 01 8640504 8665436 ECH
Gma01g00568 01 8640504 8665436 Gma02g01086 02 11787537 11800749 GST