Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00564 ATGTCACCAGATTTTACACTCTTGTTCTTCCCGGAACTCATCCAACCCCCTATCGTCACCCTCCAAGCCGCCCTATGCATCCTTCTCTTAACCTTCCTCCTCACGTTTTTCCTCACTCCAGGCGGGCTTGCGTGGGCCTGGGCCACCAAGTCCTCGACCCGGCCCATCATTCCGGGCCCAGTAATGGCCCTGCTCAGCGTCTTCACCGGCTCCACCCCGCACCGCAGGTTATCCATGCTCGCCCGCTCTTACCACGCAGAAAAGCTCATGGCTTTTTCAATCGGTCTGACCCGGTTCGTCATCTCGAGTGAACCGGAAACCGCAAAGGAGATTCTCGGCAGCCCCGGTTTTGCTGACAGACCAGTGAAGGAATCGGCCTACCAGCTTCTCTTCCACCGCGCAATGGGGTTTGCACCATACGGAGAATACTGGAGAAACCTGAGGAGAATCTCCGCCCTTCATCTCTTCTCTCCCAAGAGAATCACCGGCTCGGAAGCCTTTAGGAACGAGGTGGGGTTGAAAATGGTAGATGAAGTTAAGAAGGTTATGAAGGATAACCGACACGTGGAGGTTAAGAGGATTTTGCACTACGGGTCGTTGAACAATGTGATGATGACGGTGTTCGGTAAGTGTTATGAGTTCTACGAGGGTGAGGGTGTTGAGCTTGAGGCTTTGGTGAGCGAAGGGTATGAGCTGTTGGGTGTTTTTAACTGGAGCGACCATTTTCCGGTTCTGGGGTGGTTGGATTTGCAGGGTGTGAGGAAGAGGTGTAGGTGTTTGGTTGAAAAGGTTAATGCGTTTGTTGGGGGTGTTATTGAGGAGCATAGAGTGAAGAGGGTGAGAGGTGGGTGTGTGAAGGATGAAGGGACTGGGGATTTTGTTGATGTTTTGCTTGATTTGGAGAACGAGAACAAGCTTAGTGAGGCTGACATGATCGCTGTTCTTTGGGAAATGATATTTAGGGGAACTGACACGGTGGCAATTCTGCTGGAGTGGATCTTGGCTCGGATGGTTCTCCACCCCGACATCCAAGCCAAAGCACAGCGCGAAATAGACTCCGTCTGCGGACCCTACAGGCTCGTATCCGAAGCAGACATGCCGAACCTGCGCTACCTTCAGGGCATAGTAAAAGAAACTCTCCGCGTGCACCCTCCAGGCCCGCTACTCTCGTGGGCTCGCCTGGCGGTGCACGACGTTACCGTGGGCGGCAAGCACGTGATTCCCAAGGGCACCACCGCGATGGTGAACATGTGGGCCATAACGCACGAcgagaggttttgggccgagcccgagaggttcaggcccgagcGGTTTGTGGAGGAGGAGGATGTGAACATAATGGGGTCTGATTTGAGGTTGGCACCTTTCGGGTCTGGGAGAAGAGTGTGCCCTGGGAAGGCCTTGGGCTTGGCCTCGGTTCATCTTTGGCTCGCTCAGTTGCTACAAAATTTTCATTGGGTTCAATTTGATGGTGTCTCTGTTGAGTTGGATGAGTGTCTTAAGCTTTCTATGGAGATGAAGAAGCCACTTGCTTGCAAGGCTGTGCCTAGGGTTGCTGTTTAG 1563 0.5163 MSPDFTLLFFPELIQPPIVTLQAALCILLLTFLLTFFLTPGGLAWAWATKSSTRPIIPGPVMALLSVFTGSTPHRRLSMLARSYHAEKLMAFSIGLTRFVISSEPETAKEILGSPGFADRPVKESAYQLLFHRAMGFAPYGEYWRNLRRISALHLFSPKRITGSEAFRNEVGLKMVDEVKKVMKDNRHVEVKRILHYGSLNNVMMTVFGKCYEFYEGEGVELEALVSEGYELLGVFNWSDHFPVLGWLDLQGVRKRCRCLVEKVNAFVGGVIEEHRVKRVRGGCVKDEGTGDFVDVLLDLENENKLSEADMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQREIDSVCGPYRLVSEADMPNLRYLQGIVKETLRVHPPGPLLSWARLAVHDVTVGGKHVIPKGTTAMVNMWAITHDERFWAEPERFRPERFVEEEDVNIMGSDLRLAPFGSGRRVCPGKALGLASVHLWLAQLLQNFHWVQFDGVSVELDECLKLSMEMKKPLACKAVPRVAV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00564 520 Pfam Cytochrome P450 60 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PANTHER CYTOCHROME P450 78A7-RELATED 1 517 - -
Gma01g00564 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gma01g00564 520 PANTHER CYTOCHROME P450 78A5 1 517 - -
Gma01g00564 520 Gene3D Cytochrome P450 47 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 SUPERFAMILY Cytochrome P450 66 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g00564 520 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00564 Gma-Chr1 8597521 8599472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00564 1 517 Cytochrome P450 AT1G13710 64.176 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00564 K20619 - gmx:100783602 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00564 01 8597521 8599472 Gma01g00564 01 8597521 8599472 ECH
Gma01g00564 01 8597521 8599472 Gma02g01085 02 11761845 11764172 GST