Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00556 ATGGAGGATTATAAGAAGAACCATCCTTATCAGCAACAGCAACAGCATCAGCATCAGCAAGAAGAAGAGAAAGAAGTAGTGTGTGAGAAGATGGAGAGGTATCCTAGGGATTTGCTTCAAGGATTTTCCATCAGTGGTGTTGCTACTATTAGGGATGATAATAACAAAATTAACAATAATAACATGATGCAGCAACAACATCATGTTCTTCATCATCACCATGAGCAGCAGCAACAGCAAGAGCAGCATGAGGAGGACGATGAAGAGGTTGAGTTGAACCTTGGTCTTTCTCTCGGTGGAAGATTTGGGGTGGACAAGAACGCCAAAAAAAAGAGGCTTTTACGCTCTTCTTCTGTGGTGGGGACAATGCCTCTGTTCCGGCAGGACGATGCGGTGGCGCCGTCGGCGGCGGCGTTCCCGGCGCTCATGAGGACGTCGTCGCTGCCCACAGAGACCGAGGAGGAGTGGCGGAGGCGGAAGGAGATGCAGACGCTGCGCCGGATGGAGGCGAAGAGACGCCGCTCGGAGAAGCAGAGGGGTTCCCGGGAGGTCTTCGCCGGCGCCGGCGAGGAGGTGGAGGCAGGGGGGACTATGGCAATGGGATTCAACAAGTTTGGTTCTTCGGCGGTGGCGGTTCCGCCGCCGGGGTGGGGTGTTCCGGCAAAGCAAGTTGTTCTTGGTGATGTGTTGGGGAAGGGAAGGGGGTTTCAAGGATTGTTTGGGCAACCATCTTCTCAGGGTTCGGCTGATTCTCAAGGAGGAAGCTCTTCATCAATGTCTGAAATGGATAGCAAGGCTTTTCTAGGATCAAGTAGCTGTGGTGAAGCAAAAAGCCCTGTTAGTAATCAATCGATGCAAGAACGAAGCAGCCAGGATCCTGCGGGTTCAGGGGGAAAGATGAATGAGAATGTGACTAGAACTTCCAAAGCTGAGGCGGAGAATCCATCTAGGAAACCCCATCCTGCCCAAAAAATAACGGGAAGGCACATTGGGACAAACTCAATGGAAGACATGCCTTGTGTATTTACAAAAGGAGATGGTCCTAATGGAAGAAGAATTGAGGGTATCTTGTACAAATATGGTAAGGGGGAGGAAGTGAGGATCATGTGTGTGTGCCATGGAAACTTCCTCTCTCCAGCTGAGTTTGTTAAGCATGCTGGTGGTGGGGATGTCGCATACCCTCTTAGGCACATCGTTGTGAACCCTTCTGCTGCTCCCTTTTAG 1224 0.5098 MEDYKKNHPYQQQQQHQHQQEEEKEVVCEKMERYPRDLLQGFSISGVATIRDDNNKINNNNMMQQQHHVLHHHHEQQQQQEQHEEDDEEVELNLGLSLGGRFGVDKNAKKKRLLRSSSVVGTMPLFRQDDAVAPSAAAFPALMRTSSLPTETEEEWRRRKEMQTLRRMEAKRRRSEKQRGSREVFAGAGEEVEAGGTMAMGFNKFGSSAVAVPPPGWGVPAKQVVLGDVLGKGRGFQGLFGQPSSQGSADSQGGSSSSMSEMDSKAFLGSSSCGEAKSPVSNQSMQERSSQDPAGSGGKMNENVTRTSKAEAENPSRKPHPAQKITGRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAYPLRHIVVNPSAAPF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00556 407 Pfam Ethylene-responsive binding factor-associated repression 85 121 IPR012463 -
Gma01g00556 407 MobiDBLite consensus disorder prediction 68 89 - -
Gma01g00556 407 PANTHER AFP HOMOLOG 2 31 405 IPR031307 GO:0007165
Gma01g00556 407 MobiDBLite consensus disorder prediction 274 310 - -
Gma01g00556 407 Coils Coil 158 178 - -
Gma01g00556 407 MobiDBLite consensus disorder prediction 239 267 - -
Gma01g00556 407 Pfam Tify domain binding domain 366 399 IPR032308 -
Gma01g00556 407 MobiDBLite consensus disorder prediction 1 27 - -
Gma01g00556 407 Pfam Putative nuclear localisation signal 142 264 IPR032310 -
Gma01g00556 407 PANTHER NINJA-FAMILY PROTEIN AFP1 31 405 - -
Gma01g00556 407 MobiDBLite consensus disorder prediction 237 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00556 Gma-Chr1 8271729 8276791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00556 - - gmx:100776452 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00556 01 8271729 8276791 Gma01g00556 01 8271729 8276791 ECH
Gma01g00556 01 8271729 8276791 Gma02g01076 02 11661438 11666508 GST