Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00549 ATGAAGGATGACGCCGACGAGGAGAGGCAGTTCTTGGGTGGCGAGTGGTGGATTGTGATCAGAGAATGGGCCGtttcccttgttggGTTAACTGCAAGTTCAAACCTTTACTATGTTTCAATCAACTACACCACTGCAACATTTGCTGCAGCCGCCACAAATACTGTCCCTGCCATTACTTTCATCATGGCTGTTTTAATTAGGATGGAAAGCATTTCCGTAAAACGTGTGCATGGATTGGCCAAGATTTTGGGAAAATTAGAACCATACTTCTCACCCTTTAACAATTGTGCACTCCAAAGGATTCCTAGTGAGGATGCAGAGTCTCAACTCTTAAAAGGCAGAAAAAAATGCAGTGGAAGCTTTTGA 369 0.4228 MKDDADEERQFLGGEWWIVIREWAVSLVGLTASSNLYYVSINYTTATFAAAATNTVPAITFIMAVLIRMESISVKRVHGLAKILGKLEPYFSPFNNCALQRIPSEDAESQLLKGRKKCSGSF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00549 122 SUPERFAMILY Multidrug resistance efflux transporter EmrE 16 84 - -
Gma01g00549 122 Pfam EamA-like transporter family 24 83 IPR000620 GO:0016020|GO:0016021
Gma01g00549 122 PANTHER WAT1-RELATED PROTEIN 20 86 IPR030184 GO:0016021|GO:0022857
Gma01g00549 122 PANTHER WAT1-RELATED PROTEIN 20 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00549 Gma-Chr1 7968794 7980308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00549 25 87 Nodulin-like Gene Family AT3G18200 50.794 5.58e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00549 - - gmx:100804258 105.145