Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00541 ATGTTTTTTTCTCTGTCCATTGGTTCTTCTGCTGCATTGCCCCTCAGATGCACCTCCAAGCTCACTTCTTTCAGGGTTGTTGCTGATGCGGATGGCTTCCCTTCATTTCTTCCCAGAGAAATTCACAACATTCAAGACCCTTTTGCCAGAAAATTCGCCTTGCGCATTCAGAGGCTACCCGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCACTGGTGCAGACCAAGGAAACCCCAGTTGTTCTTCTACATGGTTTTGACAGCTCATGTCTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTATTGAGACATGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCTTGTGATGTGGTATCCAAGCGTGATCACTTCTACCAGTTTTGGAAGTCTTACATCAGAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCGGTCAATTATCCAGAAGCTGTGAAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAGCTAGCAACCTTACCCAGAGCAGTAGCCTATGCCGGGGTTAATTTATTGAAGAGCCTTCCGTTACGCCTATATGCCACCTATTTGACCTTCACAAAAATTTCCTTCAGCACCAGCCTTGATTGGACTAATGTGGGCCGCTTGCATTGTTTCTTGCCTTGGTGGGATGATGCTACAGTGGATTTTATGACAAGTGGTGGTTACAGTGTTGCTCCTTTGATAGGAAAGGTAAAACAGAATACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCAGTGCGACTCCACTGTGAGTTACCTGATGCAATTATACGCCAAATACCTTATTGTGGACATCTTCCTCATCTTGAAAGACCAGATTCTACTATCAAACTAATTGTTGAATTTGTGCAAAGAGAGAGTAAGACATTCAGTCAATGTGTTGCACAAGTATGA 1026 0.4366 MFFSLSIGSSAALPLRCTSKLTSFRVVADADGFPSFLPREIHNIQDPFARKFALRIQRLPVPVRFSENPIMSSCVKPLVQTKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKSYIRRPMILVGPSLGSAVAIDFAVNYPEAVKKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSLPLRLYATYLTFTKISFSTSLDWTNVGRLHCFLPWWDDATVDFMTSGGYSVAPLIGKVKQNTLIIWGENDRIISNKFAVRLHCELPDAIIRQIPYCGHLPHLERPDSTIKLIVEFVQRESKTFSQCVAQV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00541 341 PANTHER HYDROLASE 5 341 - -
Gma01g00541 341 Pfam Alpha/beta hydrolase family 86 319 IPR000073 -
Gma01g00541 341 PRINTS Epoxide hydrolase signature 169 182 IPR000639 GO:0003824
Gma01g00541 341 PRINTS Epoxide hydrolase signature 90 108 IPR000639 GO:0003824
Gma01g00541 341 PRINTS Epoxide hydrolase signature 110 125 IPR000639 GO:0003824
Gma01g00541 341 PRINTS Epoxide hydrolase signature 304 326 IPR000639 GO:0003824
Gma01g00541 341 SUPERFAMILY alpha/beta-Hydrolases 84 329 IPR029058 -
Gma01g00541 341 PRINTS Alpha/beta hydrolase fold signature 110 125 IPR000073 -
Gma01g00541 341 PRINTS Alpha/beta hydrolase fold signature 155 168 IPR000073 -
Gma01g00541 341 PRINTS Alpha/beta hydrolase fold signature 273 287 IPR000073 -
Gma01g00541 341 PRINTS Alpha/beta hydrolase fold signature 169 182 IPR000073 -
Gma01g00541 341 PANTHER ALPHA/BETA FOLD HYDROLASE 5 341 - -
Gma01g00541 341 Gene3D alpha/beta hydrolase 77 335 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00541 Gma-Chr1 7815013 7821349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00541 85 327 Acyl Lipid Metabolism Gene Families AT3G10840 24.841 2.70e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00541 - - gmx:100792060 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00541 01 7815013 7821349 Gma01g00541 01 7815013 7821349 ECH
Gma01g00541 01 7815013 7821349 Gma02g01061 02 11530492 11536887 GST
Gma07g02184 07 44134976 44139373 Gma01g00541 01 7815013 7821349 PCT
Gma20g00239 20 2899777 2911745 Gma01g00541 01 7815013 7821349 PCT
Gma01g00541 01 7815013 7821349 Gma07g02184 07 44134976 44139373 PCT
Gma01g00541 01 7815013 7821349 Gma20g00239 20 2899777 2911745 PCT