Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00498 ATGTCATTGGCATACACCTTCAGAGCACACGTTGAATGGAACAAATGTTATGATTTCCACAACAGACTTTGGACCGATGAGGATGTGTGGATGATATCAGTCGAGACCCCAATGGTGTTCGCGAAGGCCTGTGAAATGTTCATGAAGAAGCTCACAATGAGGGGTTGGGCTAATGTCGAAATTCACAAAGGAAATATGATATTGTCCCTAGGGATGTAG 219 0.4384 MSLAYTFRAHVEWNKCYDFHNRLWTDEDVWMISVETPMVFAKACEMFMKKLTMRGWANVEIHKGNMILSLGM 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00498 72 Gene3D Histone, subunit A 23 70 IPR009072 GO:0046982
Gma01g00498 72 SUPERFAMILY Histone-fold 25 67 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00498 Gma-Chr1 6993682 6994371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00498 12 63 CCAAT-HAP5 Transcription Factor Family AT1G54830 45.161 1.90e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00498 K08066 - gmx:100808635 65.855