Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00495 ATGGAGACAAAATCCACCAGTTCATTTACAAACTTAGTAGACCAATCAGTGTGTCCTGGAGATGTGGTTCTTGATCTTTCTAAAATGATAAACCAGACAATTAAACTTGGAGGCGGTCTACGACAGGATTGTGATGCAATTTCTGTAATGAAGGCTGGCAGACTCAGGTTCTCAAAGCCTCATAAATACTGGGTTGAAAATTCTCAGAAGAGGTATGTGCCATATGCAGAGGATTCTGTTCTTGGAATTGTTGTAGACTCCAGATCAGATAACTTTCTTGTGGACATAAAAGGACCAACTTTAGCATTTTTACCGGTGCTTGCATTTGAAGGAGGAACTAGAAGAAATATACCTAGGTTTGAGATAGGTACTTTGATTTACGTGCGGGTTATAAAAGCAAACCCTGGAATGAATCCAGAGCTATCGTGCACTGATGCCAGTGGGAAAGCTGCAGAATTTGGTGCCCTAAAAGATGGCTATATGTTTGAGTGTACAACAGGTCAATCAAGGATGCTTCTCAGTTCTCCCACATGTCCAGTACTTGATGCTTTAGGGAAGAAACTGTCCTTTGAGATAGCAGTTGGCTTAAATGGACGTGTTTGGGTCGATGCAGCATCTCCACACACAACTATTGTTGTAGCTAATGCGATTATGAACTCTGAGACATTGAGTGGTGCTCAGCAGAGAATAATGGTTGAAAAGCTGCTGCAGAGGATCCAGTGA 723 0.4191 METKSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCDAISVMKAGRLRFSKPHKYWVENSQKRYVPYAEDSVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPRFEIGTLIYVRVIKANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGQSRMLLSSPTCPVLDALGKKLSFEIAVGLNGRVWVDAASPHTTIVVANAIMNSETLSGAQQRIMVEKLLQRIQ 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00495 240 Pfam KH domain 159 207 IPR004088 GO:0003723
Gma01g00495 240 SUPERFAMILY Nucleic acid-binding proteins 70 162 IPR012340 -
Gma01g00495 240 PANTHER PNAS-3 RELATED 11 237 IPR026699 GO:0000178|GO:0003723
Gma01g00495 240 CDD S1_Rrp40 71 156 IPR037319 GO:0003723
Gma01g00495 240 SUPERFAMILY Ribosomal L27 protein-like 8 70 - -
Gma01g00495 240 Gene3D K Homology domain, type 1 155 238 IPR036612 GO:0003723
Gma01g00495 240 Gene3D - 78 154 IPR012340 -
Gma01g00495 240 Gene3D - 7 73 - -
Gma01g00495 240 PANTHER EXOSOME COMPLEX COMPONENT RRP40 11 237 - -
Gma01g00495 240 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 158 238 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00495 Gma-Chr1 6916890 6922559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00495 K03681 - gmx:100791930 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00495 01 6916890 6922559 Gma02g00268 02 2823446 2826593 GST
Gma01g00495 01 6916890 6922559 Gma18g01204 18 18852831 18858190 PCT
Gma18g01204 18 18852831 18858190 Gma01g00495 01 6916890 6922559 PCT