Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00490 AATCAAGTGAATTGCAATCAGAAGAAAATAAAGTCTCCAATGAGAAAAATAAGAAAACAAAGCTGAAAAAACCGGCCCAACTTAAAGCCTTGGAGGATTTTTATAATGAGCACAAATACCCCACGGAGGAAATGAAATTAGTACTTGCTGAAGAGTTAGGATTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAAAAGGTTAAAATATAAAAGATTGATGAAAGATGAAGTCGTTGCTAATGGGAGACAAGATTGCTCAAGTGGTGTCATCCAAGATCGTGGTAGTGGACTTGGGCAAGATTCATGCGGAAGTAGTAAGCATGCTGATCACAGGTATCTGGATTCGAAGGAGGTTGAGAGTCATGGCCTCTATAATCTGGGGCAATTtgccacgttggatagtttatgtggcactaaaattgacaacaatgcacctcactaa 446 0.343 SSELQSEENKVSNEKNKKTKLKKPAQLKALEDFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHKRLKYKRLMKDEVVANGRQDCSSGVIQDRGSGLGQDSCGSSKHADHRYLDSKEVESHGLYNLGQFATLDSLCGTKIDNNAPH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00490 147 MobiDBLite consensus disorder prediction 8 23 - -
Gma01g00490 147 Gene3D - 5 88 - -
Gma01g00490 147 CDD homeodomain 24 72 IPR001356 GO:0003677
Gma01g00490 147 Pfam Homeodomain 23 72 IPR001356 GO:0003677
Gma01g00490 147 ProSiteProfiles 'Homeobox' domain profile. 13 73 IPR001356 GO:0003677
Gma01g00490 147 SMART HOX_1 14 77 IPR001356 GO:0003677
Gma01g00490 147 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 126 - -
Gma01g00490 147 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 126 - -
Gma01g00490 147 MobiDBLite consensus disorder prediction 1 23 - -
Gma01g00490 147 SUPERFAMILY Homeodomain-like 15 80 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00490 Gma-Chr1 6783709 6784245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00490 1 125 Homeobox Transcription Factor Family AT4G03250 62.400 1.45e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma01g00490 Homeodomain 3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00490 - - gmx:100805913 211.846