Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00489 ATGCAACTCGAGTCTCTATTCTCCTTGGGTTTTTCAAGGCCTGATGCAAACCAGGTTGTGATTGAAGAAGCTACAAGAGTGGCTAATGCTCACTCTTTCATCATCAAACTTCCCGAAGGTTATGAAACTCAGGTTAGTCAACTTAAGCTAATGTTGCTTGGTGAAATTGGTCCAGTGAAAAATGCATATTTTGTGATGGTGGTTGAAACTATTGTTTTGCCAATGACCCACAAGGAGCGGTTCCAGAAATTTGGAATTGGTCCACTGAAGGGAGTGCCCTTATATGGACCTCCAGGAACTGGAAAAACACTAATTGTCCATGCTTGTACAACACAAACAAATGCCATTTTCTAA 354 0.4124 MQLESLFSLGFSRPDANQVVIEEATRVANAHSFIIKLPEGYETQVSQLKLMLLGEIGPVKNAYFVMVVETIVLPMTHKERFQKFGIGPLKGVPLYGPPGTGKTLIVHACTTQTNAIF 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00489 117 Gene3D - 46 117 IPR027417 -
Gma01g00489 117 CDD AAA 87 108 - -
Gma01g00489 117 Pfam ATPase family associated with various cellular activities (AAA) 94 114 IPR003959 GO:0005524|GO:0016887
Gma01g00489 117 Gene3D - 13 45 IPR027417 -
Gma01g00489 117 PANTHER 26S PROTEASE REGULATORY SUBUNIT 6A HOMOLOG A 64 117 - -
Gma01g00489 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 114 IPR027417 -
Gma01g00489 117 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 64 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00489 Gma-Chr1 6780176 6781370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00489 11 54 Calmodulin-binding Proteins AT2G36910 68.182 4.12e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00489 K03065 - cpap:110825911 83.5741