Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00469 ATGGAGAATAGAACAAGCTCTGTACTCCCACCTGGCTTCAGGTTTCACCCCACTGATGAGGAACTAATTGTGTACTACCTTTGCAACCAAGCCTCATCAAGGCCATGCCCTGCATCAATCATTCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGATAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGCCCACGAGAGAGGAAGTATCCAAATGGGGTGAGGCCTAATAGAGCAACCGTGTCTGGGTATTGGAAGGCCACTGGGACAGATAAAGCAATCTATAGTGGGTCTAAGCATGTAGGGGTGAAGAAGGCTTTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATTATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAATAGACAAGTTGGATCCATGAGGCTAGATGACTGGGTCTTGTGTAGGATTTACAAGAAGAAGAATATTGGAAAATCAATGGAGGCAAAAGAGGACTACCCAATAGCCCAAATCAACCTTACACCAGCAAACAATAACAGTGAACAAGAATTGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGAAATGGATTACTTGGGTCCAATATCACATATATTACCTGATGCCTCATACAATTCAACCTTTGATTTTCAAATTAACACTGCCAATGGTGGAATAGACCCGTTCGTAAAACCACAGCTGGTTGAAATCCCTTATGCAACAGATTCAGGGAAGTACCAGGTGAAACAGAATAGCACCATCAACCCCACCATATTTGTGAACCAAGTGTATGATCAAAGAGGATAA 840 0.419 MENRTSSVLPPGFRFHPTDEELIVYYLCNQASSRPCPASIIPEVDIYKFDPWELPDKTDFGEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQVGSMRLDDWVLCRIYKKKNIGKSMEAKEDYPIAQINLTPANNNSEQELVKFPRTSSLTHLLEMDYLGPISHILPDASYNSTFDFQINTANGGIDPFVKPQLVEIPYATDSGKYQVKQNSTINPTIFVNQVYDQRG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00469 279 PANTHER BNAC06G30680D PROTEIN 4 232 - -
Gma01g00469 279 PANTHER NAC TRANSCRIPTION FACTOR 56 4 232 - -
Gma01g00469 279 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Gma01g00469 279 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Gma01g00469 279 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Gma01g00469 279 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00469 Gma-Chr1 6165572 6167483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00469 1 216 NAC Transcription Factor Family AT1G69490 67.544 2.11e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma01g00469 NAM 4.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00469 - - gmx:732552 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00469 01 6165572 6167483 Gma01g00469 01 6165572 6167483 ECH