Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00462 ATGAGGATAGCTATGGGGATAGCCTACTGTCTAGAGTATATGCATGAGTTGAAACCACCCATTGCCCATAGAAACTTGCAATCTTCCTTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGATACAAAGAATGGGTCTGCAACCACACAATTCTTGGAAACATCGTCAGCCGATACCAAGGACAATGTTTACAGCTTTCAAATAGTATTGTTTGAGTTGATTACAAGGAGAATTCCTCTGGTTGGGAACAAAGAACTTCTAGCAGATTGGGCAGCAGAATATGTAAGGTGGGGGAAATCCTTAAGATATGTTGTGGATCCAAGGCTGAAGTCTTTGCAAGAAGAAGAGATTGATGAATGGTCTGAAGTGATAAGAAACTGTGTACAACCAGATCTGGAGAAAAGGCCAACTATGAAAGAAGTTACATCTAGACTCAAGGAAATCACAGCTATGGGGCCTGATGGAGCAAATCCAAAAGCATCACCACTTTGGTGGGCAGAAATGACAATTATATCCACTGATTCAAGTTGA 564 0.3989 MRIAMGIAYCLEYMHELKPPIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCDTKNGSATTQFLETSSADTKDNVYSFQIVLFELITRRIPLVGNKELLADWAAEYVRWGKSLRYVVDPRLKSLQEEEIDEWSEVIRNCVQPDLEKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMTIISTDSS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00462 187 Pfam Protein tyrosine and serine/threonine kinase 2 156 IPR001245 GO:0004672|GO:0006468
Gma01g00462 187 PANTHER PROTEIN MALE DISCOVERER 2 1 186 - -
Gma01g00462 187 Gene3D Transferase(Phosphotransferase) domain 1 1 165 - -
Gma01g00462 187 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 186 - -
Gma01g00462 187 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00462 187 SUPERFAMILY Protein kinase-like (PK-like) 2 160 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00462 Gma-Chr1 6043464 6044027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00462 1 156 Receptor kinase-like Gene Family AT3G58690 31.792 7.88e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma01g00462 PK_Tyr_Ser-Thr 3.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00462 - - gmx:100809790 361.303