Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00460 ATGCCGTCGATACTGAAACTCTTCTCCCTCCCAAAACCCTTAACCCTCAGACCGCAATTTTCGCGCCACCCGACAACAACCTCGGACCGTGGCCTCGTATTCCACGAAAAGGTGCTCTACCTTAAAGCCCTCAAAGTGAACCCCAACAAGGCCTTTCGCTTAAACCCCACCCTCCGCTCTTCCCCTCTCTCAACCCTAAAATCAGTGACGCGCTCCCTTTCTTCGTTGGGCATTCCACGCGCCGCCATGGGTCGCATCCTCGACATGCTCCCCGTGCTCCTCACGTGCGACCCCTATTTACAATTCTACCCCCTCCTCGACTTCCTCCTCCACGAGGTCCCGATCCTCTACCCCGACGTCCACCTCTCCATCCTGCGCAGCCCTAGGTTACTCGTTTGCAGCGTTAACAACCAATTGCGACCAACGTTGTGCTTTCTGAGGGAATTAGGGTTTAGTGGGCCCCACTCGCTCACGTGCCAGACGACCCTGCTGCTCGTTTCCAATGTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGGGTTTGGGGTTCACCCACGAAGAGGTTGCTAACATGGTCGTGAGGTCACCTGGGTTGTTGACTTTTAGTGTGGAGAAGAATTTGGGGCCGAAGGTGGAGTTTTTCTTGAGGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCACAGTACTTCTCTTTTAGCTTGGAACGGAGAATTAAGCCGCGGTTTGGGATGCTAAGACGTGTTGGCGTGTCAATGAATTTGGAAGATATGTTGAAGCTCATGTTTCAGCTCATTATTGAACACTAG 819 0.525 MPSILKLFSLPKPLTLRPQFSRHPTTTSDRGLVFHEKVLYLKALKVNPNKAFRLNPTLRSSPLSTLKSVTRSLSSLGIPRAAMGRILDMLPVLLTCDPYLQFYPLLDFLLHEVPILYPDVHLSILRSPRLLVCSVNNQLRPTLCFLRELGFSGPHSLTCQTTLLLVSNVEDTLLPKIEFLKGLGFTHEEVANMVVRSPGLLTFSVEKNLGPKVEFFLREMNGDVAELKRFPQYFSFSLERRIKPRFGMLRRVGVSMNLEDMLKLMFQLIIEH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00460 272 Pfam mTERF 57 263 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 SMART mt_12 49 79 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 SMART mt_12 84 116 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 SMART mt_12 191 223 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 PANTHER CGI-12 PROTEIN-RELATED 19 264 IPR003690 GO:0003690|GO:0006355
Gma01g00460 272 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 19 264 - -
Gma01g00460 272 Gene3D Transcription termination factor 3, mitochondrial 32 265 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00460 Gma-Chr1 5965286 5967045 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma01g00460 mTERF 3.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00460 K15032 - gmx:100794204 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00460 01 5965286 5967045 Gma02g00997 02 10670440 10671729 GST