Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00451 ATGGATCCACAAAGCATGCATTTTGTGCTGTCCACTGATTCCAAACCAAGGCTGAAATGGACTCCTGAGCTTCACCGACGGTTCATTGAGGCTACCAATCAGCTTGGAGGTGCAGATAAAGCAACTCCAAAGAGTCTTATGAGGGTGATGGGAATTCCGGGACTTACTTTGTACCACCTGAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAAGAACTAGAAACCTGCTCTGACAACAAACAAGAAGATTACATAGAAACCAAGAGCAGCAGTGATGGCCATTGCAGCAGGGAAATCAGTATTGGGGCCCAGAATCAACTTACGGAAAACATGCAGATAGCTCAGGCACTCCAAATGCAAATGGAAGTGCAAAGGAAACTTCATGAACAAATTGAGGTGCAAAAACATTTGCAGCTCAGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTAAAGAAGGCACAAGAAGCACTTGCTGGATACAATTCTTCCCCAGTGGGGATAGAACTTACAAAAGCTGAACTTTCTCAGCTAGTTACCATCATCAACAATGCTTGTCCAAGTTCTCCCATCTCAGAACTGACAGAAACAAGAGGGTTGAGTTTAAGCTGTGGGGAGAGGAAAAGAGACAGAGGCACTATGTGTTCACTGGAAAGTTCCTTGACATCTTCTGAAAGCTCGGGGAGAAAGGAAGAGAAACAGCCAATGGAAGAGATTGTGGAGTTCAAAAGTTCCATTAATGTTTCACTTCAATTGCCATTGATGGAAATTCTCACTGAGGATAAAGCATCCAATGGAGGCTCAAGCAATGAGGCTAGTGGGAGAAAGAGAAGTGCAACAGCAGCAGAATCTGATGATGGTAGCTGTGTTGTTGAGCAACCATGTGGGAAAAGATGTGGCAACAAGTTGAGGAAAGCCAAGTTGTCAGAAATGCTTGACTTGAACAGCCAGTGTCAGAGTGACATGGACTCAACAAGCTCAAAAACATTAGACCTAAATTGCAGTTTAAACTTTTGGGAACCATGA 1035 0.4338 MDPQSMHFVLSTDSKPRLKWTPELHRRFIEATNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQELETCSDNKQEDYIETKSSSDGHCSREISIGAQNQLTENMQIAQALQMQMEVQRKLHEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINNACPSSPISELTETRGLSLSCGERKRDRGTMCSLESSLTSSESSGRKEEKQPMEEIVEFKSSINVSLQLPLMEILTEDKASNGGSSNEASGRKRSATAAESDDGSCVVEQPCGKRCGNKLRKAKLSEMLDLNSQCQSDMDSTSSKTLDLNCSLNFWEP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00451 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 341 IPR044848 GO:0003700
Gma01g00451 344 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 15 70 IPR006447 GO:0003677
Gma01g00451 344 MobiDBLite consensus disorder prediction 216 239 - -
Gma01g00451 344 MobiDBLite consensus disorder prediction 265 280 - -
Gma01g00451 344 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 341 - -
Gma01g00451 344 Pfam Myb-like DNA-binding domain 17 68 IPR001005 -
Gma01g00451 344 Gene3D - 14 72 - -
Gma01g00451 344 MobiDBLite consensus disorder prediction 264 286 - -
Gma01g00451 344 Pfam MYB-CC type transfactor, LHEQLE motif 113 159 IPR025756 -
Gma01g00451 344 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Gma01g00451 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 72 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00451 Gma-Chr1 5819046 5821218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00451 6 301 G2-like Transcription Factor Family AT1G69580 50.809 3.42e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma01g00451 Myb_DNA-binding 3.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00451 - - gmx:100784670 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00451 01 5819046 5821218 Gma01g00451 01 5819046 5821218 ECH
Gma01g00451 01 5819046 5821218 Gma02g00993 02 10582048 10583826 GST