Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00435 ATGAAACTTAGACTTATGAATGGAATAGCATACAATGAGACATGGTTTGGCAGTTGGGGTTACAAATTTGGTCGAGGATGCTTTGGTGTAACTCAATCCATGTACCACAAGGCCATACAAGCAATAAGAAGCATGTCATTATACTTGATCATACACCACATTGCCAATTCTAGCCATGGCATTCCACTAATCTTCTCAAGGAACCAGACACTTTCAGATCAATCCCTAGTGACCCTTGGTGACCTATTTTGTTACATGATTGAGATGGCAACAAGGGTTATTGTTGAGGCCTTGAAAAGAACAGAGTTTAAATGGGTTTCAAGACAAGAAGTTAGAGATGCTGCTCGTGCATACATTAGTGACACAAGTTTGGTAGATTTTGTGTTGAGGTCACTAGGAAACCATGTTGAAGGAAACTACTTGGTTCGCTGA 432 0.4028 MKLRLMNGIAYNETWFGSWGYKFGRGCFGVTQSMYHKAIQAIRSMSLYLIIHHIANSSHGIPLIFSRNQTLSDQSLVTLGDLFCYMIEMATRVIVEALKRTEFKWVSRQEVRDAARAYISDTSLVDFVLRSLGNHVEGNYLVR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00435 143 Coils Coil 138 143 - -
Gma01g00435 143 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 1 88 - -
Gma01g00435 143 PANTHER PHD FINGER PROTEIN MALE STERILITY 1 87 143 - -
Gma01g00435 143 PANTHER PHD FINGER PROTEIN MALE STERILITY 1 1 88 - -
Gma01g00435 143 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 87 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00435 Gma-Chr1 5618687 5619214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00435 1 143 PHD Transcription Factor Family AT5G22260 45.198 4.90e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00435 - - gmx:100780210 250.366