Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00431 ATGGAAGAGAGAAATAATGATGCTGAGAAACTTGATGAAGTTATGCTACCGGGGTTCAGGTTTCATCCAACTGATGAGGAGCTTGTAGGGTTTTACCTCAAGAGAAAGATTCAGCAACGCCCTTTGACTATTGAGCTCATCAAGCAGCTTGATATCTACAAATTTGACCCTTGGGATCTTCCAAAGTTGGCCACCACAGGAGAGAAAGAGTGGTATTTTTACTGTCCAAGGGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCAACTGGGACTGATAGGCCTATCTACTCCTCAGAAGGTTCCAAGTGCATTGGCCTGAAGAAATCCCTAGTCTTTTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTCAGGCTACCTTCTCTCACTGACTCACTCTCCCCAAAGTACATAGACAAGACCATTCCTGCTAATGAATCTTGGGCTATCTGCAGGATATTCAAGAAAATCAATGCTACAGCTCAAAGAACTTTATCTCAATCTTGGGCCTCTTCCCTACCTCCTGATACAAGAACCTCTGATCATCATATCCAAACCAAAGATCAAGACAGCACTACTCAGTTTTGTTCAGACAACATGCCAATGACAAATAAAACTACCTTAACCAGCCAGTTCTGTAATAACAATTACAATGATTCACAACCCTTACCCACTAATAGTAGTAGTAGTCCTCTTTGTCCCTTAGATGTTGCCTCATACAAATCCATCATTAACCCATTGCTTTACAAAGCCTTTGATCATTTTCCCATTTCTAATGAAGACCTTAGAACTAGCTTGCTATTCTCACCCCCCTTTGAAACATCAGATGCTAATCCCAAATCTACAATGGTCGACGTTTCTTCCATGTTGTTGAGCTTGCCATCCTCAGTGCTTGGAGATTTTAACAAGACTACTTCAGAAGACACAAATACAGCTTCAAACTTTGGTGTATTGCAAGAGCACTGTAGTGGCTACCCAATACCATTTCTACCTGAGATGCAAACCACATTTGGTAACCAACAACAACAATATTGTGATAATATTAATGCATTGGTAAAGGGTCCTAATGTGAATGTGCCTCGTGTTGATGACCAAGAGTTGGAGTTGGAGACAGTAGTACAACGATCCATTGGGTTTCCATTAAGTGCTACTATGCCTTTGAATATTGTCGATGCATGGAAGTCAAATAATCTGCTTTGGGATACTTCCTCTTTTCCTTGTGATATGCCATCTAGTTATTATTCCACAACTAAGTGTTATACTTAG 1314 0.4094 MEERNNDAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLTIELIKQLDIYKFDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSPKYIDKTIPANESWAICRIFKKINATAQRTLSQSWASSLPPDTRTSDHHIQTKDQDSTTQFCSDNMPMTNKTTLTSQFCNNNYNDSQPLPTNSSSSPLCPLDVASYKSIINPLLYKAFDHFPISNEDLRTSLLFSPPFETSDANPKSTMVDVSSMLLSLPSSVLGDFNKTTSEDTNTASNFGVLQEHCSGYPIPFLPEMQTTFGNQQQQYCDNINALVKGPNVNVPRVDDQELELETVVQRSIGFPLSATMPLNIVDAWKSNNLLWDTSSFPCDMPSSYYSTTKCYT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00431 437 MobiDBLite consensus disorder prediction 184 214 - -
Gma01g00431 437 Gene3D NAC domain 24 176 IPR036093 GO:0003677|GO:0006355
Gma01g00431 437 PANTHER PROTEIN FEZ ISOFORM X1 1 435 - -
Gma01g00431 437 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Gma01g00431 437 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Gma01g00431 437 ProSiteProfiles NAC domain profile. 15 172 IPR003441 GO:0003677|GO:0006355
Gma01g00431 437 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00431 Gma-Chr1 5544852 5546740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00431 1 380 NAC Transcription Factor Family AT1G26870 50.754 6.03e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma01g00431 NAM 1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00431 - - gmx:100170721 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00431 01 5544852 5546740 Gma01g00431 01 5544852 5546740 ECH
Gma01g00431 01 5544852 5546740 Gma02g00979 02 10430739 10432752 GST