Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00430 ATGGATCCCACAGTCGTATTCTTGCTAATTACGCCCATCAATGAGTTTAGATCTGGTGGACCCCTCAAACAAAACTTAACTTCCCATGTGGGGCCTACCACTCTTACTGTGTTTCTGAGTGCCCATTATAGCGGAGGGGATCTGGTGCCCAAGTTCAATGCTGATGTTGGTGGAAGTTCAAAGCAGTTTTCCTGTGAATTAGAGAATTTCGCCATCTGGAACCAGCTTGGTAATGTTAGTGGCAGGCTTTTGGCCCTCGAGAAAACGCGTCCCCTCTTTCCTCCCGTGCCTCTTTCCTCTTTCCCTTTGTACTCTTCATTCCTCGTCCTCCTCTATCGCAGTCGCAGCTCCAACAAGCGCCGCGGCATCCCCGTCGAAGCCGGCGGCAAGCCTGGTCTTGCGCTGCGCAACCACTGCTTTGACTCGCCACTCAGCTCCTCGTCCTCCTTTTTCCATTGTTGTCGTTTGCAAGCTTATTCAGAACAAGATTCACCACCCTCACCTGGGAAGGGCTCAAGAAGCAATTCAAGGAAAAGCACTGGGAATGTGGATGATGTAAGGTCCAATGGTTGGTTAGATGCCATGAAGGCTTCTTCGCCTCCTTGGAAGAAGCTAATTAAAGGGTCGAGTGCTCAGGTTGCTTCAATTGACGATGACTTTCAACATTCTATTTCTATTGGTTTATCTCAGCAACACAAGCGATTACGCTCTTTGGCTGATCATGTTCCTGATGTTTATAAAAGGGCATCACTTTTAGAGGTTCTTATCAGGAATAAGATTATGATTGACCTTTTCAGCTCTTCACATCATTTGGATCCACCTCTAGGTGGTTTTGATTTAGTAGATAAGTCTAGGAGGGCAAATACAACTTATGTTGTGATTGAGATGCTCTGGAAAATGGTTACTATATTGGGTTTGGTACCTGCTCAAGCAATATTGTACCCGCAGCTCTGTGAGGCCCTAGAGCTCACGTGCGCTATCCTTCTCCCCGAAAAGCACCTATTTTCTCTTGCCCTCTGTCGTGGCTCTTTTCCTCTGTTGTCCCTCTCACCATCCGTCGTACCTCTGTCATCACCGTCGCGTTTGGATGGCTTTTTTGGTGGCCTGAGTTTGCTTGCTTTGGTGGCTGAGACCACAACTTTTCCCATACACTTGATCAAGACCAGGCTCCAACTCCATGGAGACTCACTTTTATCGAGTCACCCCACTAGTGCATTTAGAGTAGGCTTGGGCATTATTCGTGAACAAGGTGCTCTTTGCCTTTATAGTGGCTTGTCGCCAAAAATTTTTAGACACATGTTCTACACGCTTATTCAAAATGTGGTTTCTGTTGATAATGCTTCTATCTCTATTATTGGCAAGGCTGTAGTTGGTGGAATTTTTGGTGTTGTGGCTCAGGTGAGAACTTTGTGGTTGTGTTGTCTGGTAAGCTACAGGCAGTTGTTGATGAATGGGCATCAAGTCTTTTCTGGGTATGTTATAGAGAACTTATATGGTTCTATACCAGATGTGGTGGTTCCATTAATGTATACGGAATACACAACTCGCAAGGTCCTAGTTATGGAATGGATTGAGGTTCGTGCTTATGCATTGGTTATTCCTGAGTTGATTGATCTTAAAGATGACCTACAAAAGCATTTGCTTATTGAATCCGCTTGTCCCTTGAACATCAACAATGCATTATTAATGGAATGTCCTTCAGCTCCTGCCACCTCCATTGGAGGCACTGGATCATCTGTGATAATGATATTGTTATATCTAATGTCAATGGAGAAGCTGTTGTAA 1785 0.451 MDPTVVFLLITPINEFRSGGPLKQNLTSHVGPTTLTVFLSAHYSGGDLVPKFNADVGGSSKQFSCELENFAIWNQLGNVSGRLLALEKTRPLFPPVPLSSFPLYSSFLVLLYRSRSSNKRRGIPVEAGGKPGLALRNHCFDSPLSSSSSFFHCCRLQAYSEQDSPPSPGKGSRSNSRKSTGNVDDVRSNGWLDAMKASSPPWKKLIKGSSAQVASIDDDFQHSISIGLSQQHKRLRSLADHVPDVYKRASLLEVLIRNKIMIDLFSSSHHLDPPLGGFDLVDKSRRANTTYVVIEMLWKMVTILGLVPAQAILYPQLCEALELTCAILLPEKHLFSLALCRGSFPLLSLSPSVVPLSSPSRLDGFFGGLSLLALVAETTTFPIHLIKTRLQLHGDSLLSSHPTSAFRVGLGIIREQGALCLYSGLSPKIFRHMFYTLIQNVVSVDNASISIIGKAVVGGIFGVVAQVRTLWLCCLVSYRQLLMNGHQVFSGYVIENLYGSIPDVVVPLMYTEYTTRKVLVMEWIEVRAYALVIPELIDLKDDLQKHLLIESACPLNINNALLMECPSAPATSIGGTGSSVIMILLYLMSMEKLL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00430 594 MobiDBLite consensus disorder prediction 160 187 - -
Gma01g00430 594 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 2 55 - -
Gma01g00430 594 MobiDBLite consensus disorder prediction 160 186 - -
Gma01g00430 594 SUPERFAMILY Mitochondrial carrier 372 465 IPR023395 -
Gma01g00430 594 ProSiteProfiles Solute carrier (Solcar) repeat profile. 359 449 IPR018108 -
Gma01g00430 594 Pfam Mitochondrial carrier protein 373 440 IPR018108 -
Gma01g00430 594 Gene3D Mitochondrial carrier domain 348 516 IPR023395 -
Gma01g00430 594 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 2 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00430 Gma-Chr1 5518601 5537269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00430 3 52 Polysaccharide Lyase AT1G09890 74.000 2.50e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00430 K15112 - gmx:100817004 157.147