Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00427 ATGGACGTTTCCGAGCTCGCCAAGAAGCTCGGTCTCTCCGATTCCAAACTCGTTGTACGGAAAGCTGCCGAGCTCCGTCGCCTCTGCGAAGTCCAGTTCGATTCCTCCGTCATTGGAGTCGGCGAGGTTGCAAAATCTATCATATGCTTGGAAATCGCCGCCATGAGACTCAGCATTCTCTTCGACCGATCCTCTGCGGCGAGGCTGAGCGGAATGTCCGAAAGAGCTTACATCAGATCCTACAATTCACTCCACAACGGCCTTGGCGTCAAGATGAAGTTAGATGTGAGGGAATTGGCGATTCAGTTTGGTTGCGTTCGCATTATTACTCTAGTTCGCGACGGTCTTAAATTATATAAGGATCGGTTTGTTTCGTCGTTGCCGGCTTCTCGTCGTGCAAGCGCTGATTTCACGCGTCCAGTGTTCACTGCTGTCGCTTTTTATCTATGTGCTAAGAAACACAAGCTTAAAGTGGACAAACTTAAGTTAATTGAGCTCTGTGGTACATCTGAATCTGAGTTTTCTAGTGTTTCTGCTACTATGAAGGATTTGTGCCATGATGTTTTTGGGGTTGCGAAGGAAAAGAAGGATCCTAAGCAAGTGCAGTCAAATCGAGATTTGCTTGATGTTTTGCCAAGTAAAAGGAAAGCTGAGGATGGTGGTTATTCATCCGATGATGGTCCAGAGCTTTCAAGTTATAAAAAAGCCAAGAAAATGGAAAAACGTGATTTTGAGAAATGGAAATCTTCTGTGCTTGCATCCAATGAACAAAACAAGAAAGCGCCTTGCAAGCGAACCAGACAGACTAGTCTCAACTTTCTCAACAAAGCTTCCGATAATCAAGAGTTGGAGGCAATGTGA 861 0.4541 MDVSELAKKLGLSDSKLVVRKAAELRRLCEVQFDSSVIGVGEVAKSIICLEIAAMRLSILFDRSSAARLSGMSERAYIRSYNSLHNGLGVKMKLDVRELAIQFGCVRIITLVRDGLKLYKDRFVSSLPASRRASADFTRPVFTAVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVSATMKDLCHDVFGVAKEKKDPKQVQSNRDLLDVLPSKRKAEDGGYSSDDGPELSSYKKAKKMEKRDFEKWKSSVLASNEQNKKAPCKRTRQTSLNFLNKASDNQELEAM 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00427 286 CDD Orc6_mid 93 188 - -
Gma01g00427 286 MobiDBLite consensus disorder prediction 250 286 - -
Gma01g00427 286 MobiDBLite consensus disorder prediction 230 249 - -
Gma01g00427 286 MobiDBLite consensus disorder prediction 215 286 - -
Gma01g00427 286 Gene3D - 92 188 - -
Gma01g00427 286 PANTHER BNAC05G50940D PROTEIN 1 280 - -
Gma01g00427 286 Pfam Origin recognition complex subunit 6 (ORC6) 4 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Gma01g00427 286 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 280 IPR020529 GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00427 Gma-Chr1 5450231 5453142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00427 1 284 Core DNA Replication Machinery Family AT1G26840 64.437 3.13e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00427 K02608 - gmx:100795599 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00427 01 5450231 5453142 Gma01g00427 01 5450231 5453142 ECH