Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00390 ATGAAGAGATCATATACAGTACTAGTAATGGAAGATAATGACTTCTTGGATTCAAACGGTGATGAAGAGATCGATGTGAAGGATCAAAATCTTGAATCAGCTAAAGGGGAAAAGGGAGAGACTAGAGAAGAAAACAAGATGTTAGAGTTCTATGGAATCCTTCATCACGATAAACCTGATGATGCTACAAATGCTAAAGGTGTGTTTAGCCATATTGAGGAAAACGAAGAAAGTGAACTTGTGTCACTTTCTCTTGGGATATCAATATCTAAAGGCAAGCCTAGCAAGAATGAGAAAATGATTAATAATGGAATTGAAAAGAGAGAAGATGAGGATGTGCATAAACGACTTGTACTTGGGTTAGATATCAATTTGGACCCTGTAGATCAAGATGAATTAGCTGCAAATAATTCCACCCCTGAAAGTAGCTTTGGTGAGGGAGGGAAGGAAGATGAACCAACTGAGATGTGGCCACCCAGTAAAGTTTCGAAGACAATGAAAAGTGAGGATAAAAGTGAAGCTTCACCACATTATCAGCCCAAGAAGACTAGGGTTTCTATTAGAGCCAGATGTGATACCCAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATGGCCAAAGGAAATCCATGCCCCCGAGCTTACTATCGATGCACTGCTTCTCCATCTTGCCCTGTAAGAAAGCAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATTACCACCTATGAAGGAACACACAATCACCCTCTTCCTATGTCAGCCACTGCAATGGCCTGCACAACTTCTGCTGCAGCTTCCATGCTTCAATCTCCCTCATTGAGTTCACAACATGGACTAGTCGATTCAGCTATATCCTCCATCATCAACTCCAGTGCTGCTAATTACTACAATCCTAATAATGCTCTAAACTTCTCCACACACCAAGTTTCTAGACCAAACCAATTCTACTTCTCCAACTCATCCATTTCAACCTTGAATTCTCACCCTACAATCACTCTGGACCTTACAGCACCCCCAACTTCCTCAAACTCAAGCTTCACTCACATGCCAAAATACTCATCAACAAACCTGAATTTCTCCTCTGGTTTCTCTCCTCTACATTCTAGCATGCCTCAATCACCTTGGAGCAGTTATAATTACTTCAATTCTGGAACACTTTCTCAAAATAGAAAACATGGTGGTAATTACTTGTTAAACACTGGAAATCAAAATCAACCACATTCTTTAGGAAATCTCCATCAACCTATTTACATGAGAAGCAATACCATTTCTCAGCATTCTTTGCCTGATCCCATTGTTGCTGCAACCAAGGCAATCACAAGTAACCCAAAGTTTCAATCAGCACTAGCAACTGCTCTCACAACATATGTTGGCAATGAAGCTGGTGGTGGTAGGTTAAGAGAAAATCATGTTCTTGAGAGTGCAGAACTGATGAACTTAAAGCTATGTAGTGAAAATAGCATAGGAAACTCAAGTATAGTTCAACTACCACTACTGGAGCAATGGAAGTGA 1530 0.4046 MKRSYTVLVMEDNDFLDSNGDEEIDVKDQNLESAKGEKGETREENKMLEFYGILHHDKPDDATNAKGVFSHIEENEESELVSLSLGISISKGKPSKNEKMINNGIEKREDEDVHKRLVLGLDINLDPVDQDELAANNSTPESSFGEGGKEDEPTEMWPPSKVSKTMKSEDKSEASPHYQPKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTASPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSATAMACTTSAAASMLQSPSLSSQHGLVDSAISSIINSSAANYYNPNNALNFSTHQVSRPNQFYFSNSSISTLNSHPTITLDLTAPPTSSNSSFTHMPKYSSTNLNFSSGFSPLHSSMPQSPWSSYNYFNSGTLSQNRKHGGNYLLNTGNQNQPHSLGNLHQPIYMRSNTISQHSLPDPIVAATKAITSNPKFQSALATALTTYVGNEAGGGRLRENHVLESAELMNLKLCSENSIGNSSIVQLPLLEQWK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00390 509 MobiDBLite consensus disorder prediction 133 185 - -
Gma01g00390 509 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 10 509 IPR044810 GO:0003700
Gma01g00390 509 SMART WRKY_cls 196 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma01g00390 509 Gene3D WRKY domain 181 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma01g00390 509 ProSiteProfiles WRKY domain profile. 191 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma01g00390 509 SUPERFAMILY WRKY DNA-binding domain 189 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma01g00390 509 MobiDBLite consensus disorder prediction 164 178 - -
Gma01g00390 509 Pfam WRKY DNA -binding domain 197 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma01g00390 509 PANTHER WRKY TRANSCRIPTION FACTOR 72B 10 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00390 Gma-Chr1 4785070 4790972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00390 25 344 WRKY Transcription Factor Family AT5G15130 43.988 2.38e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma01g00390 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00390 - - gmx:100797911 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00390 01 4785070 4790972 Gma01g00390 01 4785070 4790972 ECH
Gma01g00390 01 4785070 4790972 Gma06g01704 06 17151477 17156609 ECH
Gma01g00390 01 4785070 4790972 Gma04g01680 04 45770569 45776711 ECH
Gma01g00390 01 4785070 4790972 Gma05g00281 05 2533087 2538635 ECH
Gma01g00390 01 4785070 4790972 Gma17g00922 17 7867378 7873082 ECH
Gma01g00390 01 4785070 4790972 Gma19g00181 19 2218178 2221556 ECH
Gma01g00390 01 4785070 4790972 Gma17g00922 17 7867378 7873082 PCT
Gma01g00390 01 4785070 4790972 Gma05g00281 05 2533087 2538635 PCT
Gma17g00394 17 3188507 3192874 Gma01g00390 01 4785070 4790972 PCT
Gma13g00979 13 23895542 23899527 Gma01g00390 01 4785070 4790972 PCT