Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00354 ATGATGCCGGAAAGTGACATCACTCTATCCTCTTTCAGGCTTCGTTGGGACGTGTTCCTGAGCTTCAGGGGCACCGACACGCGGGACACTTTCACCATGAGCCTCTACCACGCTCTCCACCGCCGCGGCCTCCGCGTCTTCCGCGACGACGACGGGCTGGAGCGCGGCGACGAGATCCAGAAGAAGCTTCTGGAAGCCATTGAAGACTCCGCCGCCGCCGTCGTCGTTCTCTCTCCCGATTACGCGTCTTCCCATTGGTGCCTCGACGAACTTGCCAAGATTTGCAAGTGTGGGAGGCTGATCCTTCCGGTTTTCTACTGGGTCGACCCTTCCCATGTCAGAAAGCAAAAGGGTCCCTTTGAGGATTCTTTCGGGTCCCATGCAAACAAGTTTCCTGAAGAGAGTGTTCAGCAGTGGAGGGATGCCATGAAAAAAGTGGGTGGAATCGCTGGTTATGTTTTGGATGAGAAATGTGAAAAGAGTGATAAGCTCATTCAGCATTTGGTGCAAATACTTTTGAAGCAGATGAGGAATACACCATTGAATGTGGCTCCTTACACAGTTGGGCTGGACGATAGAGTTGAAGAGTTGAAAAAGCTGTTAGATGTGAAATCCAACGATGTAAGGGTTTTGGGGTTGTATGGAATGGGAGGGGTTGGTAAGACAACCCTAGCCAAGAGCCTCTTCAACAGCCTTGTTGTTCACAATTTTGAGCGACGCAGTTTCATTACAAATATTAGATCACAAGTCTCCAAACATGATGGTTTGGTTTCTCTTCAAAACACAATTCATGGTGATCTTTCTGGTGGGAAAAAGGATCCAATCAACGATGTCAATGATGGTATTTCTGCTATCAAAAGAATAGTACAAGAGAATCGAGTTTTGTTGATCTTAGATGATGTTGATGAAGTAGAGCAGCTTAAATTTTTGATGGGTGAGAGGGAATGGTTTTACAAAGGAAGCCGTGTTGTAATAACCACAAGGGATAGAGAAGTTTTAACTAAGGCTAAGAGTTATGTTGATAAACATTATGAGGTGAAGGAATTGGAATTCTCTCCATCAATGGAATTGTTTTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGAGGGTTTTTTGGACCTTGCAAAGCAAATTGTGGAGAAGACGGGAGGGTTGCCCTTGGCTTTGGAAGTTTTTGGCTCTTTTCTGTTTGACAAGAGGACGATGAGGGAATGGAAAGATGCTGTGGAGAAGATGAAACAGATTAGTCCTTCTGGTATTCATGATGTGCTGAAAATCAGTTTTGATGCGTTGGATGAACAAGAGAAATGTATATTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGAAATGAAGAGGGAGGATGTGGTTGATATATTGAATGGGTGTAATTTTAGAGGAGATATAGCACTGACTGTACTCACTGCAAGATGTCTAATTAAAATCACTGGTGATGGTAAACTGTGGATGCATGATCAAGTTAGAGACATGGGAAGGCAAATTGTGCATAGTGAAAACCTTGCAGACCCTGGTCTACGTAGCAGGCTCTGGGATCGTGATGAAATCTTGATTGTCTTAAAGAGTATGAAGGGAACAAGAAATGTTCAAGGGATAGTCGTAGATTGTGTTAAGAGAAGAATGTCCACTCCTAGAGATCGCTCTGCTGATGAAATTACTTGGGAAAATTTTCGACGTAAGCCTAGTTGTAAATTGGCATTAGAATATATTAAAGAGAAGTATAAAAAGTATGTGCGGGATAGAGAAGAGAAAGCAAAAGAGGTTGTACTTCAGGCTAAGAACTTTGAATCAATGGTTTCCTTAAGATTGCTTCAAATTAATTATTCGAGATTGGAAGGACAATTCAGATGCCTTCCCCCAGGACTGAAATGGCTACAATGGAAACAATGTCCATTAAGGTATATGCCTTCTAGCTATAGTCCTTTGGAACTTGCTGTCATGGATCTCTCGGAAAGTAACATTGAAACTCTGTGGAGCAGAAGCAATAACAAGGTGGCTGAGCACTTGATGGTTTTAAACCTCTCCAATTGCCACCGTTTGACAGCAACTCCTGATTTAACTGGGTATCTCTCTCTTAAAAAAATTGTTTTGGAAGAATGCTCTCATTTAATTAGGATTCATGAATCACTTGGAAATCTAAGTTCCTTAGTTCACTTAAACTTGCGTTTCTGCTATAACCTTGTCGAACTACCTAGTGATGTCTCTGGGATGAAACATCTCGAGGACCTTATTCTTTCCGACTGCTGGAAATTGAAAGCATTACCAAAAGACTTAAGTTGCATGATTTGTTTAAGACAACTTCTTATTGATAACACTGCTGTAACTGAGCTTCCTGAGTCCATCTTCCACCTCACAAAACTTGAAAATCTGAGTGCAAATGGATGCAACTCTCTGAAGAGGTTACCTACCTGCATTGGGAAACTCTGCTCCCTGCAAGAATTGTCACTCAATCATACAGCATTAGAGGAATTGCCATATTCTGTTGGTTCTTTGGAAAAACTAGAGAAGCTTAGTTTGGTGGGGTGCAAGTCACTGTCAGTGATTCCTAACTCTATTGGGAACCTAATTTCATTGGCTCAATTATTTTTGGACATAAGTGGAATTAAAGAATTGCCTGCTTCTATTGGTTCTTTATCATATTTAAGGAAACTGTCTGTGGGAGGCTGCACTTCTCTTGACAAATTGCCTGTGTCAATAGAAGCATTAGTTTCTATTGTTGAACTTCAGTTAGATGGGACAAAAATTACCACTTTGCCAGATCAAATTGATGCCATGCAAATGTTAGAGAAGCTTGAGATGAAAAATTGTGAGAATCTGAGGTTTCTACCAGTATCATTTGGCTGTCTGTCAGCTCTTACCAGTTTGGACTTGCATGAGACAAATATTACTGAATTGCCAGAATCAATAGGAATGTTGGAAAATCTTATTCGGTTGAGGTTAGACATGTGCAAACAGCTCCAAAGGCTTCCAGATTCCTTTGGAAATTTGAAATCTTTGCAATGGTTACAGATGAAGGAAACAACACTTACTCATCTACCTGATAGCTTTGGGATGCTCACAAGCCTGGTAAAACTAGACATGGAAAGAAGGCTCTATCTTAATGGGGCTACTGGGGTCATAATTCCTAACAAACAAGAACCTAATTCAAAGGCAATATTAAGATCTTTTTGCAACCTAACCTTGCTGGAAGAGTTAAATGCTCATGGATGGGGAATGTGTGGAAAAATTCCAGATGACTTTGAAAAGCTATCATCACTAGAAACTTTAAGTTTAGGCCACAACAATATTTTCAGTCTTCCAGCCAGCATGATAGGACTATCCTATCTCAAAAAGCTTTTATTGTCAGATTGCAGGGAGCTCATTTTTCTGCCTCCTCTTCCATCTAGCCTTGAAGAACTTAATCTTGCAAACTGTATTGCAGTACAGTACATGCATGATATTTCAAACTTGAAGCTCTTAGAGGAGTTGAACCTTACAAATTGTGAAAAGGTGGTGGATATACCAGGCCTTGAACACTTGAAGTCCTTAAGGAGGTTGTACATGAATGGTTGCATTGGATGCTCCCATGCTGTCAAGAGAAGATTTACCAAGGTTCTACTTAAAAAATTGGAGATTTTGATTATGCCTGGAAGCAGAGTCCCGGACTGGTTTACAGCAGAACCAGTTGTCTTTTCCAAGCAAAGAAACCGTGAGCTTAAGGGTATTATTTGTTCTGGTGTTCTCTCTTTCAATAATATACCTGAAAACCAAAGAGAAGGACTGCAGTTAGAGGATGTTCAAGGAAAAATCTTCAATTTGACTGATAAAGTGTTTAGCACAACGTTTCGCCTTCTAGGAGTACCTAGGACAAATAAAGACCACATATTTTTGCGCAGATTTGGAGTTAATTCTTCGTTAGTTTTTCAGTTACAAGATAAATATACCTTACATTTGAAAAAGAGAGACCCTCCTCTTATTGAGAGGCTGGAGCTGAAGAACTGCAGAATTCTTTTAGTTTTTGAAGGCGATGATGATTACGTGGGAGACGAAGGATCACTAGATGAAAGCCAATACTCTGTTTCACAAAAATTAGCCAAGTTCTTCAACTTTGCTGCAAATGACCCATGTGTGTGA 4134 0.409 MMPESDITLSSFRLRWDVFLSFRGTDTRDTFTMSLYHALHRRGLRVFRDDDGLERGDEIQKKLLEAIEDSAAAVVVLSPDYASSHWCLDELAKICKCGRLILPVFYWVDPSHVRKQKGPFEDSFGSHANKFPEESVQQWRDAMKKVGGIAGYVLDEKCEKSDKLIQHLVQILLKQMRNTPLNVAPYTVGLDDRVEELKKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNSLVVHNFERRSFITNIRSQVSKHDGLVSLQNTIHGDLSGGKKDPINDVNDGISAIKRIVQENRVLLILDDVDEVEQLKFLMGEREWFYKGSRVVITTRDREVLTKAKSYVDKHYEVKELEFSPSMELFCYHAMRRKEPAEGFLDLAKQIVEKTGGLPLALEVFGSFLFDKRTMREWKDAVEKMKQISPSGIHDVLKISFDALDEQEKCIFLDIACLFVQMEMKREDVVDILNGCNFRGDIALTVLTARCLIKITGDGKLWMHDQVRDMGRQIVHSENLADPGLRSRLWDRDEILIVLKSMKGTRNVQGIVVDCVKRRMSTPRDRSADEITWENFRRKPSCKLALEYIKEKYKKYVRDREEKAKEVVLQAKNFESMVSLRLLQINYSRLEGQFRCLPPGLKWLQWKQCPLRYMPSSYSPLELAVMDLSESNIETLWSRSNNKVAEHLMVLNLSNCHRLTATPDLTGYLSLKKIVLEECSHLIRIHESLGNLSSLVHLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTALEELPYSVGSLEKLEKLSLVGCKSLSVIPNSIGNLISLAQLFLDISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQLDGTKITTLPDQIDAMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQMKETTLTHLPDSFGMLTSLVKLDMERRLYLNGATGVIIPNKQEPNSKAILRSFCNLTLLEELNAHGWGMCGKIPDDFEKLSSLETLSLGHNNIFSLPASMIGLSYLKKLLLSDCRELIFLPPLPSSLEELNLANCIAVQYMHDISNLKLLEELNLTNCEKVVDIPGLEHLKSLRRLYMNGCIGCSHAVKRRFTKVLLKKLEILIMPGSRVPDWFTAEPVVFSKQRNRELKGIICSGVLSFNNIPENQREGLQLEDVQGKIFNLTDKVFSTTFRLLGVPRTNKDHIFLRRFGVNSSLVFQLQDKYTLHLKKRDPPLIERLELKNCRILLVFEGDDDYVGDEGSLDESQYSVSQKLAKFFNFAANDPCV 1377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00354 1377 Gene3D - 349 433 IPR042197 -
Gma01g00354 1377 Gene3D Ribonuclease Inhibitor 869 1042 IPR032675 -
Gma01g00354 1377 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 152 IPR035897 -
Gma01g00354 1377 SMART LRR_typ_2 909 932 IPR003591 -
Gma01g00354 1377 SMART LRR_typ_2 768 791 IPR003591 -
Gma01g00354 1377 SMART LRR_typ_2 1090 1113 IPR003591 -
Gma01g00354 1377 SMART LRR_typ_2 720 744 IPR003591 -
Gma01g00354 1377 SMART LRR_typ_2 815 838 IPR003591 -
Gma01g00354 1377 SMART LRR_typ_2 1003 1025 IPR003591 -
Gma01g00354 1377 SMART LRR_typ_2 956 979 IPR003591 -
Gma01g00354 1377 SMART LRR_typ_2 862 885 IPR003591 -
Gma01g00354 1377 SMART till_3 15 149 IPR000157 GO:0007165
Gma01g00354 1377 Gene3D - 10 174 IPR035897 -
Gma01g00354 1377 Pfam TIR domain 16 177 IPR000157 GO:0007165
Gma01g00354 1377 Gene3D - 175 342 IPR027417 -
Gma01g00354 1377 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1330 IPR044974 GO:0006952
Gma01g00354 1377 Gene3D Ribonuclease Inhibitor 589 868 IPR032675 -
Gma01g00354 1377 PANTHER TMV RESISTANCE PROTEIN N-LIKE 13 1330 - -
Gma01g00354 1377 PRINTS Disease resistance protein signature 383 397 - -
Gma01g00354 1377 PRINTS Disease resistance protein signature 210 225 - -
Gma01g00354 1377 PRINTS Disease resistance protein signature 288 302 - -
Gma01g00354 1377 PRINTS Disease resistance protein signature 836 852 - -
Gma01g00354 1377 Gene3D Ribonuclease Inhibitor 1050 1273 IPR032675 -
Gma01g00354 1377 SUPERFAMILY L domain-like 903 1219 - -
Gma01g00354 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 443 IPR027417 -
Gma01g00354 1377 SUPERFAMILY L domain-like 490 944 - -
Gma01g00354 1377 Pfam NB-ARC domain 192 415 IPR002182 GO:0043531
Gma01g00354 1377 ProSiteProfiles TIR domain profile. 14 176 IPR000157 GO:0007165
Gma01g00354 1377 ProSiteProfiles Leucine-rich repeat profile. 1092 1114 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00354 Gma-Chr1 4280983 4289164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00354 781 985 WRKY Transcription Factor Family AT4G12020 33.010 2.21e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00354 - - gmx:100784137 2723.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00354 01 4280983 4289164 Gma01g00354 01 4280983 4289164 ECH