Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00326 ATGTCGGTCTCCTGCTCCAACTGCTTCCCCGACGACGACCACTCCTTCCTCCTCTGCGGCGAGGACTCCTCCGGAATCATGGATTCCTCGCCGGAGTGTTCCTCCGACCTCGATTCCTCGCCGCCGTCGGAGGCGGAGTCCATCGCCGGATTCATGGAAGACGAGCGCAACTTCGTCCCCGGATTCGAATACCTCAATAGGTTCCAATCTCGCTCTCTCGACGCCTCTGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTGCAGGCTTATTACGCTTTTCAACCGGTCACGGCTTATCTTTCCGTTAACTACTTGGATAGGTTCTTGAATTCTCGACCGTTGCCGCCGAAAACGAATGGGTGGCCACTGCAACTTCTCTCTGTTGCGTGCTTGTCTTTAGCAGCAAAGATGGAGGAATCTCTAGTTCCATCTCTTTTGGACCTTCAGGTAGAAGGTGCTAAATACGTATTTGAACCCAAAACAATTAGAAGAATGGAGCTACTTGTTCTGGGCGTGTTGGATTGGAGGCTAAGATCGGTTACCCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCAACTGGGACTTTTACCGGGTTCCTCATTTCACGTGCTACACAAATTATCTTATCTAATATACAAGAGGCTAGCTTTCTTGCGTATTGGCCATCATGCATTGCTGCAGCAGCCATTCTCCATGCAGCAAATGAAATTCCTAATTGGTCTCTCGTTAGGCCTGAGCATGCAGAGTCATGGTGTGAGGGGTTAAGAAAGGAGAAAATTATAGGGTGCTACCAATTAATGCAAGAACTTGTGATTGACAATAACCAGAGGAAACCCCCTAAGGTGTTACCACAGCTGCGAGTGACAATATCTCGGCCCATTATGAGATTCCCTAGGGAAGGGGATTTTGCAAAGTGTGTGTGGGTGTGCGTGAGAGAGAGGTGGGAAATTAGATACAAAGATGCATTTAATGGTTTGGTCGTGCAAGCGTGGAAGAAAGAAGTGTGTAGTTTGGAATTCAAAGATGCGCTTGTTATTGGTGAAAGAGAAGAGAATGGTGGTGGGACATTGCTTCAGAGCTTGGAAGAAGAAAAAAAGCATAGTCTCAGAGCAGATATCAATAGGGTATTGAAAGACTTTGAAGTTTGA 1161 0.472 MSVSCSNCFPDDDHSFLLCGEDSSGIMDSSPECSSDLDSSPPSEAESIAGFMEDERNFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPVTAYLSVNYLDRFLNSRPLPPKTNGWPLQLLSVACLSLAAKMEESLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILHAANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRVTISRPIMRFPREGDFAKCVWVCVRERWEIRYKDAFNGLVVQAWKKEVCSLEFKDALVIGEREENGGGTLLQSLEEEKKHSLRADINRVLKDFEV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00326 386 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Gma01g00326 386 PANTHER CYCLINS 1 298 IPR039361 -
Gma01g00326 386 Gene3D - 61 179 - -
Gma01g00326 386 SMART cyclin_7 83 172 IPR013763 -
Gma01g00326 386 Pfam Cyclin, N-terminal domain 51 178 IPR006671 -
Gma01g00326 386 CDD CYCLIN 84 171 IPR013763 -
Gma01g00326 386 SUPERFAMILY Cyclin-like 163 280 IPR036915 -
Gma01g00326 386 SMART Cyclin_C_2 181 297 IPR004367 -
Gma01g00326 386 Pfam Cyclin, C-terminal domain 181 286 IPR004367 -
Gma01g00326 386 Gene3D - 52 242 - -
Gma01g00326 386 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 298 - -
Gma01g00326 386 SUPERFAMILY Cyclin-like 42 178 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00326 Gma-Chr1 3799906 3802993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00326 1 294 Core Cell Cycle Gene Families AT1G70210 65.552 2.02e-128 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00326 K18810 - gmx:100780369 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00326 01 3799906 3802993 Gma01g00326 01 3799906 3802993 ECH