Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00317 ATGCTTCCAAGGATTCCACCTCTTCATCTTCATCATGAAAGACCCTTGACATCAGAGAAGGATAAAACCCAGATCATTGAGCTTGCATGGTTCCTGATGTCATCATCCCTTACTCAATGCATTCATGTGTGTGAGGTGTGTAAGAGAGTTTTCGAAAATAAGAGTGCTTTAAATGGTCATTCAGCTATTCATAAATGGGCTATTGATTTTGAATTAATGGTTTACAAATGTGCTGAACGTGGAAAAGTATATGATCAGTAA 261 0.3755 MLPRIPPLHLHHERPLTSEKDKTQIIELAWFLMSSSLTQCIHVCEVCKRVFENKSALNGHSAIHKWAIDFELMVYKCAERGKVYDQ 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00317 86 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Gma01g00317 86 Gene3D Classic Zinc Finger 31 86 - -
Gma01g00317 86 SUPERFAMILY beta-beta-alpha zinc fingers 41 66 IPR036236 -
Gma01g00317 86 SMART c2h2final6 42 64 IPR013087 -
Gma01g00317 86 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 64 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma01g00317 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00317 - K09228 sdm:118180178 42.743