Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00308 ATGGATCTGGATCGCTACAATAGAAATCTGGACGACATACAGAGGGAGGCACAGATGATGAGCCTGATAGAGCACCCCAACATGGTGAGGGCCTACTGCTCCTTCGTGGTGAAGCGGAGCCTATGGGTGGTGATGGCATTCATGGCGCAGGGCTCCTGCCTGCACCTCGTGAAGGCCGCTTATCTCGAGGGATTCGAAGAGGCCGCCATCGGATCTATCCTCAGGGAGACTCTCAAGGTGTTGGAGTATCTCCACCGACCCGGCCACATTCATCGCGACGTCAAGGCTGGGAATATTCTCCTCGACGATAATGACAAGGTCAAGCTCATTGACTTCGGCGTCTCCGCTTGCATGTTCGACACCGGCAACCGCTAG 375 0.5573 MDLDRYNRNLDDIQREAQMMSLIEHPNMVRAYCSFVVKRSLWVVMAFMAQGSCLHLVKAAYLEGFEEAAIGSILRETLKVLEYLHRPGHIHRDVKAGNILLDDNDKVKLIDFGVSACMFDTGNR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00308 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00308 124 Gene3D Phosphorylase Kinase; domain 1 1 50 - -
Gma01g00308 124 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 124 - -
Gma01g00308 124 Gene3D Transferase(Phosphotransferase) domain 1 51 124 - -
Gma01g00308 124 Pfam Protein kinase domain 11 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00308 124 SMART serkin_6 3 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00308 124 Coils Coil 3 23 - -
Gma01g00308 124 SUPERFAMILY Protein kinase-like (PK-like) 8 120 IPR011009 -
Gma01g00308 124 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00308 Gma-Chr1 3612377 3612751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00308 1 124 MAP Kinase Kinase Kinase Kinase AT4G10730 72.581 7.40e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma01g00308 Pkinase 8.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00308 - - gmx:100783699 220.705