Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00307 ATGCAGGGCGCAGGGGTAACCTTTGTAATGGTTGTGGTTCAGGTCTTGAGTGTGGGTTTGAACACTATGATCAAAGCATCATTGTCCAAAGGGATGAGCATTTTTGTTTTTGTTGCGTATTCAAACCTTTTCGCATTCTGTTTTCTGCTTCTAGCAACCACAATTCGTCACAGAAACAGAGCTCCCACACCGATCAATAATTCCATACTCTTCAGGATTTTTGTTCTTGGCTTGCTCAGCGTTTCCATACAGACGCTCATTTATACTGGACTTGGGTATAGCTCTCCCACTCTGACGTCAACCATGGAGGATCTTATTCCAGCTTATACTTTCATAATTGCCATTATTTCCGGGATGGAAAAGTTGGATCTAAAACTACAAAGCTGCCAAGCAAAATCCATTGGGACTGTGATCTCAATTGCTGGAGCATTAATTATGACCTTATACAAGGGATTGCCTATGACAAGTGATGTGATGCCAAACAATGTTTTTCTTTCATCTCAACAATCCAAATGGCTACTAGGAGGATTTCTCCTTGCAGTTGGTTGCTTTTTTTGTTCAGTCTCGCTTGTTATTCAGACATGGACTATCAAAGACTACCCTGAGGAGCTAATGTTGATAACCATTAGTACCAGTTTCTCTGTTATCCTATCTTTCATAGTCGCTTTCATTGCAGAAGAAAATCCTAAGGCATGGACACTTAAACTTGATATGGAGTTGGTGTGCATACTTTATTCAGCAATTTTTGTGATGTCTACACGAAATGTGGTGAATGTATGGGCGTGTCGAAAGAAGGGGCCTGTATATGTTGCTATGTTCAGTCCTTTAGGGATTGTCATTGCACTTGCCATGGGGATTGTATTTTTGGGAGATGCTTTATATCTTGGAAGTTTGATAGGAGCTGCTATAATAGCTATTGGGTTTTATGCTGTAACATGGGGCCAGGCTCAAGAGGAAACAATGGGTTACGAAAAGCATGGAACTTGTAGCATTATCTCATCGCCTTCTTCTGAAACCCCTCTATTGCTGAACAAAAGCAAAGATTCAAGTTATTTTGTTTGA 1062 0.4058 MQGAGVTFVMVVVQVLSVGLNTMIKASLSKGMSIFVFVAYSNLFAFCFLLLATTIRHRNRAPTPINNSILFRIFVLGLLSVSIQTLIYTGLGYSSPTLTSTMEDLIPAYTFIIAIISGMEKLDLKLQSCQAKSIGTVISIAGALIMTLYKGLPMTSDVMPNNVFLSSQQSKWLLGGFLLAVGCFFCSVSLVIQTWTIKDYPEELMLITISTSFSVILSFIVAFIAEENPKAWTLKLDMELVCILYSAIFVMSTRNVVNVWACRKKGPVYVAMFSPLGIVIALAMGIVFLGDALYLGSLIGAAIIAIGFYAVTWGQAQEETMGYEKHGTCSIISSPSSETPLLLNKSKDSSYFV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00307 353 Pfam EamA-like transporter family 174 312 IPR000620 GO:0016020|GO:0016021
Gma01g00307 353 Pfam EamA-like transporter family 9 147 IPR000620 GO:0016020|GO:0016021
Gma01g00307 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 316 - -
Gma01g00307 353 PANTHER WAT1-RELATED PROTEIN 13 318 IPR030184 GO:0016021|GO:0022857
Gma01g00307 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Gma01g00307 353 PANTHER WAT1-RELATED PROTEIN 13 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00307 Gma-Chr1 3600355 3605631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00307 10 352 Nodulin-like Gene Family AT5G40240 39.316 4.69e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00307 - - gmx:100814600 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00307 01 3600355 3605631 Gma01g00307 01 3600355 3605631 ECH
Gma01g00307 01 3600355 3605631 Gma19g00105 19 1091076 1094749 ECH
Gma01g00307 01 3600355 3605631 Gma02g00288 02 3015117 3018261 GST