Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00306 ATGGCGGGGAGTTCTTCATCAGCTGCTGGGTCtcttcttcctgtaattaggcatcatgtgttcctcaacttcagagggcaagacacccgtgacaacttcattagacacatttatgaacaactacagaggaaaaagattgaaacatatatagattacagactatccagaggccaagagatttcacctgcattccacagagcaatagaagaatctatgatttatgttgtcgttttctctgagaactatgcatcttccacatggtgtttggatgaactcacaaagatactcgattgcaagaagagatatggaagggttgtgatcccagttttctataaggtggatccatcaattgttaggaatcagagagagacgtatgcagaagcattcgttaagcatgaacatcgatttcaagacaagatcgacaaagtgcatggatggaaggctgctctaactgaagcagctggcctctcgggctgggattcacaaGTAACCAGACCAGAAGCCACACTTGTTGCAGAaATTGTGAAAGATATTTTGGAAAAATTGGATAGTTCTTCCATTAGTGATCATCAAGGAATTGTTGGAATTGAAAACCATATTACACGAATCCAGTCCTTGATGAACCTTGAGTCACCGGATATTCGGATCATAGGAATTTGGGGCTTGGGGGGAATTGGAAAGACTACAATTGCAAGGAAAATATATCACAAATTGGCGCCTCATTTCGGTTCCAGCAGTCTTGTTTTAAATGTTCAAGAAGAAATACAAAGACATGGAATACACCATAGCAGAAGCAAATATATATCAGAGCTTTTGGGGAAAGAAAAAAGTTTTTCAAATGAAAGACTCAAAcagaaaaaggttctcctcattcttgatgatgttaatgattcaggtcaactaaaagatttaattggagggcgtggtgattttggccagggcagtagaattattttgaccagcagaggcatgcaggtgcttaagaatgctgaagctgatgaaatctatgaagttaaggagatgagttttcaaaattctctaaaccttttcagtatacatgcttttcaccaaaaccatccaagagaaacatacatggacttatcaataaaggtattgcattatgctaaagggattccactagctctccagagtttgggctcattgctttatgatagaacaaaggaagcatgggaaagcgagttgcaaaagttggaaaagcttcccgatcctaaaattttcaatgtattaaaactaagttatgatgggcttgatgaggagcagaagaatatatttcttgacatagcttgcttttatagaggtcatgaggaggttatcgtggcacaaaagctagagagctgtggtttctctgctaccattggaatggatgttctcaaagataagtgtctgatatctactttggaaggtaaaattgagatgcatgatttaatacaagaaatgggacaagaaattcttcgtcaagaatgttgccataatccaggaaaatgcagtcgattgtggaaggttgaggaaattcatcaagttttaaaagataacaagGGGACGGATGCAGTACAGTGTATATTGCTAGACACATGCAAAATCAATAAAGTTAAACTACATTCTAAAACTTTCGAAAAGATGGAAAATCTGAGGATGCTCCATTTTGAGTCTTATAACCACTGGAGAGAATCAAATGTAGTTCTTGTATCATCTCTTGAAAGTCTTCCGGATGGGTTAAAAATTCTTCGTTGGGATTGCTTCCCTCAAAGATCTTTGCCGCAGAACTATTGGCCACAAAATCTAGTGAGACTGGAAATGACACGTTGCCATCTTGAACAACTTTGGGAACCAGATCAGAAATTACCGAATTTGAAAAGATTGGACCTGAGTTATTCCGGGAAACTAATTCGAATACCGGACCTTTATCTGTCACCAGATATTGAAGAAATATTACTGACTGGTTGTAAAAGCTTGACTGAAGTTTACTCCTCTGGATTCCTCAACAAGCTGAATTGTTTATGTTTAAATGGATGTGATGAGCTTAGGAGTTTGACTATTCTGAGCAATATTCTATGGAGATCATCAGGATTAATTCTTGTTTCTGGCTGTTACAAGCTTGAAACGTTTTCAATCAGTAATAGAACCGAAGTGGTTCAATTATCCGGTTGCTCACACCATGATACATTTCCGACTGGGAAAGGATCGTATTGTCAGGAATACCCCAGACGTTGGGTCAAAGATAACAAAAAGGGTGAAAGCGCGATGCCTTCCCTAGTCATGCCTACTTTTAACCCCGTTGTTAGTATAGACAGACATGAAGTTGAAGACAAAGAAGAGAAGAAAGAGGAGTACCCAACATTATCAATTCCGAATGAGTTGTGTTGGTTAGATCTCTCTAAGTGTGAATCCCTTACAAGCCTTTCACTTGAGTTTGACCTTTCTAAGTTGAAATTCCTCAAGAAACTTCTTCTCAATGGTTGCTCAAAGTTCGAAATATTCCCAGAAATTAAGGACACAATGGAAAATCTAGCTGTGCTCAAATTAGACAGAACAGCAATAAAGACCCTACCTTCATCCTTGTGCCGTTTGGTAGCGCTTGAAGAATTGAGCCTGCACAGTTGCGCAAGTCTTGAGACTATTCCATCTTCCATTGGAGATCTCAGCAAACTCTGCAAGTTAGACCTTACCAACTGGTGTGACAAATTAACAGAAATCCCAAACAACATTGGTCGCTTGTCATTATTAAGGGAACTGTCACTGAGTGAGAGCGGAATTGTGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCTTGGAATTACTGGATTTAACCGAATGCAAAAAGCTTGAATGCATCCCTCGGCTTCCAGCATTTCTAAAACAACTATTGGCATTTGATTGCCAATCCATTACAAGAGTGATGTCAAATTCACTTATTCAAATCCCATCAAAGTCCAAAGAGGGTGGTATCTTCAGATTTTATTTCACCAATGGTCAACAACTTGATCCAGGTGCTCGTGCTAATATTGTGGATGAGGCAAGGCTTAGGATGACCGAGGATGCATATAGGTCTGTGTTCTTTTGTTTTCCAGGGAGTGAAGTTCCTCATTGGTTCCCTTTTCGTTGCGAGGGACATTCAATAACTATACATAGAGATTCTCTAGATTTTTGCAGAAATGACAGGCTCATTGGTTTCGCTCTGTGTGTCGTTTTCCAACTGCCAGATACCAATGATATTGAAGGCAGATACGGTTCTTTTAGTTACTGCCTAAAATATGAATCTGATTTTCGCATACACATTCTTCCCAACAATGATAAGTTAACAAGCCATTTCAATTGGAAGGGTCGAGAGCGAAAACTTGATCAAGATCACACATTTCTGTGGAAATATAACTTAGAATCCCCAAGGATGAGGGGCATGAGCGGTATGCTCCCTCATGCTCGCAGCTTCACTTTTGAGATCAGTCCATATATTGATGATAATTACATTGGGCGGCGACCATCTTTCTTATCAATTGTCAGAGACATCAAATCAACTGTCAAAGTAAAAGAATGTGGAATATGCCCTCTATATACCAAAGAGAAAGATGATGATAGTAATGCTGTGCTGGTGGCTATTCTGGATCTGTGA 3630 0.2708 MAGSSSSAAGSLLPVIRHHVFLNFRGQDTRDNFIRHIYEQLQRKKIETYIDYRLSRGQEISPAFHRAIEESMIYVVVFSENYASSTWCLDELTKILDCKKRYGRVVIPVFYKVDPSIVRNQRETYAEAFVKHEHRFQDKIDKVHGWKAALTEAAGLSGWDSQVTRPEATLVAEIVKDILEKLDSSSISDHQGIVGIENHITRIQSLMNLESPDIRIIGIWGLGGIGKTTIARKIYHKLAPHFGSSSLVLNVQEEIQRHGIHHSRSKYISELLGKEKSFSNERLKQKKVLLILDDVNDSGQLKDLIGGRGDFGQGSRIILTSRGMQVLKNAEADEIYEVKEMSFQNSLNLFSIHAFHQNHPRETYMDLSIKVLHYAKGIPLALQSLGSLLYDRTKEAWESELQKLEKLPDPKIFNVLKLSYDGLDEEQKNIFLDIACFYRGHEEVIVAQKLESCGFSATIGMDVLKDKCLISTLEGKIEMHDLIQEMGQEILRQECCHNPGKCSRLWKVEEIHQVLKDNKGTDAVQCILLDTCKINKVKLHSKTFEKMENLRMLHFESYNHWRESNVVLVSSLESLPDGLKILRWDCFPQRSLPQNYWPQNLVRLEMTRCHLEQLWEPDQKLPNLKRLDLSYSGKLIRIPDLYLSPDIEEILLTGCKSLTEVYSSGFLNKLNCLCLNGCDELRSLTILSNILWRSSGLILVSGCYKLETFSISNRTEVVQLSGCSHHDTFPTGKGSYCQEYPRRWVKDNKKGESAMPSLVMPTFNPVVSIDRHEVEDKEEKKEEYPTLSIPNELCWLDLSKCESLTSLSLEFDLSKLKFLKKLLLNGCSKFEIFPEIKDTMENLAVLKLDRTAIKTLPSSLCRLVALEELSLHSCASLETIPSSIGDLSKLCKLDLTNWCDKLTEIPNNIGRLSLLRELSLSESGIVNLPESIAHLSSLELLDLTECKKLECIPRLPAFLKQLLAFDCQSITRVMSNSLIQIPSKSKEGGIFRFYFTNGQQLDPGARANIVDEARLRMTEDAYRSVFFCFPGSEVPHWFPFRCEGHSITIHRDSLDFCRNDRLIGFALCVVFQLPDTNDIEGRYGSFSYCLKYESDFRIHILPNNDKLTSHFNWKGRERKLDQDHTFLWKYNLESPRMRGMSGMLPHARSFTFEISPYIDDNYIGRRPSFLSIVRDIKSTVKVKECGICPLYTKEKDDDSNAVLVAILDL 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00306 1209 Gene3D - 16 183 IPR035897 -
Gma01g00306 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 434 IPR027417 -
Gma01g00306 1209 PRINTS Disease resistance protein signature 375 389 - -
Gma01g00306 1209 PRINTS Disease resistance protein signature 216 231 - -
Gma01g00306 1209 PRINTS Disease resistance protein signature 933 949 - -
Gma01g00306 1209 PRINTS Disease resistance protein signature 282 296 - -
Gma01g00306 1209 Gene3D - 184 338 IPR027417 -
Gma01g00306 1209 Pfam TIR domain 18 195 IPR000157 GO:0007165
Gma01g00306 1209 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 712 IPR044974 GO:0006952
Gma01g00306 1209 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 788 1041 IPR044974 GO:0006952
Gma01g00306 1209 SUPERFAMILY L domain-like 479 967 - -
Gma01g00306 1209 Gene3D - 340 429 IPR042197 -
Gma01g00306 1209 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 712 - -
Gma01g00306 1209 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 788 1041 - -
Gma01g00306 1209 Pfam NB-ARC domain 199 406 IPR002182 GO:0043531
Gma01g00306 1209 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Gma01g00306 1209 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 159 IPR035897 -
Gma01g00306 1209 Pfam C-JID domain 1029 1194 IPR045344 -
Gma01g00306 1209 Gene3D Ribonuclease Inhibitor 774 980 IPR032675 -
Gma01g00306 1209 Gene3D Ribonuclease Inhibitor 523 692 IPR032675 -
Gma01g00306 1209 SMART till_3 17 156 IPR000157 GO:0007165
Gma01g00306 1209 SMART AAA_5 213 342 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00306 Gma-Chr1 3512087 3589017 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00306 792 948 WRKY Transcription Factor Family AT4G12020 35.669 2.37e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00306 - - gmx:100814075 1539.63