Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00296 ATGAGACTCACGAATACGCATGCGATGGATCTAGAAGGTGGAACAACTCGTCGAAACTCCGTTAAGAGAGAGTCGTGGAGAACGGTTGTGACTCTGGCGTACCAGAGTTTAGGAGTGGTGTACGGTGATTTGAGCATTTCGCCGTTGTACGTTTTCAGAAGCACGTTTGCGGAGGACATTAAGCACACGGAGAGCAACGAGGAGGTTTTCGGCGTTTTGTCGCTGGTTTTCTGGACCATAACGCTGGTCCCGCTGCTCAAGTACGTTTTCGTGGTGTTAAAAGCTGACGATAACGGCGAAGGAGGCACTTTCGCGCTTTATTCCTTGTTGTGCCGCCACGCCAGAGTGAGTTCTCTCCCGAATTGCCAGGTGGCGGACGAGGAGCTGTCGGAGTACAGAAAGGATTCCCGCGGCGCGGCTCCCGAGAGCAGCTTTGCGGCGCGGCTCAGAAGCACGTTTGAGAAGCACAAGGTTTTGCAGAGGGTTTTGCTGGTTTTGGCGCTGATTGGGACTTGCATGGTCATTGGAGATGGCATCTTCACCCCGGCTATTTCTGTTTTCTCGGCTGTGTCTGGACTGGAGCTTTCAATGTCCAAGGAGAAGCACGCATATGTCGAAGTTCCAGCTGCATGCATCATATTGATAGGCTTGTTTGCCCTTCAACATTATGGCACACACAGAGTTGGCTTCTTGTTTGCTCCTGTAATTATCACATGGCTTTTCTGCCTTAGTACCATTGGGATATACAATATATTTTACTGGAATCCTCATGTATACAAAGCACTCTCTCCATATTATGCTTTCCAACTTTTAAGGAAAACTCAGAAAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTGTGCATTACAGGATCAGAAGCCATGTTTGCTGATCTTGGGCACTTTACACAATTATCAATCAAGATTGCTTTTACTTCTGTGGTTTATCCATCTTTAATTTTTGCATATATGGGGCAAGCTGCTTATCTATCTAAACATCATAACATTGAGCAAGATTATCACTTTGGGTTTTACGAATCTGTACCAGAGAAATTGAGAtggcctgttctcgttatagcgatacttgctgcagttgtgggaagtcaagccattatcactggaacattctcaatcatcaagcaatgctccgcattaagttgtttcccaagagttaaagtgattcacacatcatccaaaattcatggacaaatatatatccccgagatcaattggctattgatgaTATTGTGTTTGGTAGTAACTATTTGTTTCAGAGACACAAAGCATCTGGGTAATGCCTCAGGTTTGGCAGTTATCACAGTGATGCTGGTGACCACTTGTTTGATGTCACTGGTTATTGTACTTTGCTGGCACCAGAATGTTCTCCTTGCACTTGGGTTTGTTTTCATATTTGGCTACATTGAGGTTCTCTTCTTCTCTGCTTCTCTTATCAAGTTCCTGCAAGGAGCATGGGTGCCTATAGCATTGGCACTTGTGTTTCTGACTTGCATGTGTGCTTGGCACTATGGCACACTCAAAAAGTATGAATATGATGTTCAAAACAAGGTTTCCACCAACTGGCTACTCAGCCTATGTCCCGGCTTAGGTATTGTCCGAGTGCGTGGGGTTGGCCTTATACACACCGAGCTAGTGTCTGGAATCCCAGTAATCTTCTCCCACTTTGTAACCAATCTCCCAGCCTTCCATCAGGTCCTAGTTTTTCTATGCATCAAGCACGTGCCGGTTCCACATGTTACACCTGAGGAACGGTTTCTAGTTGGTCGCGTTGGTCCAAAAGAGTTCAGACTCTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAGAGATGATGTTGAGTTTGAGAATGATCTTCTGTGCTGCATAGCAGAGTTCATACGCACAGAAAGAACTGGGTCGAACTCTTCAAATGATGAGCCCGTAAAGGATGACAGAATGGCAGTTGTAGGGACATGTTCTACACATTCCCTTTTGATGACGGAGAATAAAGTAGATAATGTGGAGAATGTAGACTTGCCAGGACCATCAGAACTAAAGGAGATAAAGTCACCCAATGTGATCCAGCAGCAGAAGAAAAGGGTAAGGTTTTTGGTACCAGAGAGTCCAAAGATTGACACAAGTGTAATGGAAGAGTTGGAGGAGGTGATGGAAGCCTGGGAGGCTGGGGTAGCTTACATTATAGGACAGACACACATGAGAGCAAAATCAGGGTCTAGCATGTTGAAGAAAATAGGCATTAATTTAGTGTATGAATTCCTTAGAAGAAATAGCAGGGCACCCTCCTTTGTTACTGGTGTGCCTCATGCATCATCTCTGGAAGTTGGGATGATGTACCAAGTTTAA 2367 0.4208 MRLTNTHAMDLEGGTTRRNSVKRESWRTVVTLAYQSLGVVYGDLSISPLYVFRSTFAEDIKHTESNEEVFGVLSLVFWTITLVPLLKYVFVVLKADDNGEGGTFALYSLLCRHARVSSLPNCQVADEELSEYRKDSRGAAPESSFAARLRSTFEKHKVLQRVLLVLALIGTCMVIGDGIFTPAISVFSAVSGLELSMSKEKHAYVEVPAACIILIGLFALQHYGTHRVGFLFAPVIITWLFCLSTIGIYNIFYWNPHVYKALSPYYAFQLLRKTQKGGWMALGGILLCITGSEAMFADLGHFTQLSIKIAFTSVVYPSLIFAYMGQAAYLSKHHNIEQDYHFGFYESVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEINWLLMILCLVVTICFRDTKHLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFIFGYIEVLFFSASLIKFLQGAWVPIALALVFLTCMCAWHYGTLKKYEYDVQNKVSTNWLLSLCPGLGIVRVRGVGLIHTELVSGIPVIFSHFVTNLPAFHQVLVFLCIKHVPVPHVTPEERFLVGRVGPKEFRLYRCIVRYGYRDVHRDDVEFENDLLCCIAEFIRTERTGSNSSNDEPVKDDRMAVVGTCSTHSLLMTENKVDNVENVDLPGPSELKEIKSPNVIQQQKKRVRFLVPESPKIDTSVMEELEEVMEAWEAGVAYIIGQTHMRAKSGSSMLKKIGINLVYEFLRRNSRAPSFVTGVPHASSLEVGMMYQV 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00296 788 Pfam K+ potassium transporter 34 614 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma01g00296 788 PANTHER POTASSIUM TRANSPORTER 6 9 788 - -
Gma01g00296 788 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma01g00296 788 TIGRFAM kup: potassium uptake protein 32 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00296 Gma-Chr1 3378272 3384668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00296 9 788 Inorganic Solute Cotransporters AT1G70300 73.410 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00296 K03549 - gmx:100793141 1556.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00296 01 3378272 3384668 Gma01g00296 01 3378272 3384668 ECH
Gma01g00296 01 3378272 3384668 Gma02g00299 02 3137066 3143781 GST
Gma01g00296 01 3378272 3384668 Gma18g01232 18 19944464 19950303 PCT
Gma18g01234 18 20007213 20028509 Gma01g00296 01 3378272 3384668 PCT