Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00294 ATGGCTTCATCAATGAGGATCTCAAGGCTGCTCTCTCGTTCTTTTCTTTCTGCTTCCACTACTCCTTTGTTCTCTAGAGGTGGAAGTGGTGCTCTTGGTGCAGGGCTCAGTAAATTCAGCACTGCTGCTGCAATTGAAGAACCAATCAAACCACCAGTTAAAGTAGAACACACCCAGCTCTTAATCGATGGAAAATTCGTTGATGCTGCTACTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGATGTGATTTCTCATGTTGCTGAGGGTGACCATGAAGATGTTGATCGAGCAGTTGCAGCTGCTCGCAAAGCCTTCGACCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTTGAAAAGCACAATGATGAGCTTGCTGCTCTTGAGACTTGGGATAATGGGAAGCCATATGAACAATCTGCTCAAATCGAAATTCCAATGCTGGTTCGCCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCATATCATGTGCAAACATTGCATGAACCCATTGGTGTTGCTGGTCAGATCATTCCGTGGAACTTCCCTCTTGTCATGTTTGCCTGGAAGGTTGGGCCAGCATTGGCCTGTGGTAACACCATTGTTCTCAAAACAGCTGAGCAGACTCCATTATCTGCTTTGTATGCATCAAAGTTGCTTCATGAGGCTGGACTTCCTCCTGGCGTTCTGAATGTAATATCTGGCTTTGGTCCTACCGCTGGTGCTGCCATTGCTAGTCACATGGACATAGATAAGCTTGCTTTCACTGGTTCAACCGAAACTGGAAAAGTTGTCCTTGAATTGGCAGCTAGAAGTAATCTTAAGCCTGTTACTCTGGAGCTTGGTGGGAAATCTCCTTTTATAGTATGCGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTAGAACATTTGTACACGAACGTGTGTACGATGAATTTATTGAGAAAGCAAAGGCACGTGCTTTGAAGCGTGCTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATACTGAAGTATATTAGGTCCGGTGTTGAAAGTGGAGCTACTCTTGAAACTGGAGGAGATAGATTTGGCAACTCAGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTAAGGATGACATGCTGATTGCAAAGGAAGAGATCTTTGGTCCAGTGCAAACCATATTAAAATTCAAGGACCTTGATGATGTGATTCAAAGAGCAAATAACACACACTATGGCCTTGCAGCAGGGGTGTTCACAAAAAACATTAACACAGCTAACACTTTGACTAGAGCATTGCGAGTTGGAACAGTGTGGATTAACTGCTTTGATACATTTGATGCAGCAATTCCCTTTGGAGGGTACAAAATGAGTGGCCAAGGAAGAGAAAAAGGAGAATACAGTCTCAAGAACTACTTGCAAGTGAAGGCTGTTGTTACATCCTTGAAGAACCCTGCTTGGCTTTGA 1617 0.4434 MASSMRISRLLSRSFLSASTTPLFSRGGSGALGAGLSKFSTAAAIEEPIKPPVKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQTILKFKDLDDVIQRANNTHYGLAAGVFTKNINTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNPAWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00294 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Gma01g00294 538 CDD ALDH_F2BC 55 530 - -
Gma01g00294 538 Pfam Aldehyde dehydrogenase family 67 528 IPR015590 GO:0016491
Gma01g00294 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Gma01g00294 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Gma01g00294 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 26 538 - -
Gma01g00294 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 26 538 - -
Gma01g00294 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Gma01g00294 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00294 Gma-Chr1 3327086 3331007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00294 3 538 Aldehyde Dehydrogenase Gene Family AT3G48000 76.766 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00294 K00128 - gmx:100786773 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00294 01 3327086 3331007 Gma01g00294 01 3327086 3331007 ECH
Gma01g00294 01 3327086 3331007 Gma02g00302 02 3178533 3182912 GST
Gma01g00294 01 3327086 3331007 Gma18g01238 18 20095592 20099200 PCT
Gma18g01238 18 20095592 20099200 Gma01g00294 01 3327086 3331007 PCT