Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00284 ATGGCTAAGAATACATCGTCAAATGAGTCGTCTTCATTGAATTCCGACAAGGACAAGGCTTCCGCTCCGTTGCCGTCATCGGATGACTCAGAGTCTCCGAAAAGCACACCACCAAAGTCTCCGCCACCATCGCCGCCGCTGCCACCATCACCGCCGAAAAAATCTGCTCCTCCGCCAACAGAATCTCCGCCGGCGCCGGCGcattcttcaccgccaactccgtcacaatccccgccaccaactccgcctcattctccaccaccTTCCCCTTCTCCGCCAACTCCACCGCCGGAAAAATCACCACCGTCTCCGTCTAATTCTCCGCCGCCTCCATCAACTCCCCCGCCGTCAAAAGATTCAGCTCCTCCACCCTCTCCGTCAGAACCACCACCTTCGCCACCACCGTCGCCTCCACCGCCACCCCCACAAAATTCTCCTCCGTCACCACAATCTCTCACCCCTCCTCCACATTCACTTTCGCCTCCAACTGCAATTTCAACCCCACCTTCACCTGCTTCCCATGTTACTCCGCCGCCGGCGCCGTTGGGTTCAGGGCCAAACCACCCTTCACCACCGCGACCACCGCCGTCTACCCAACCGAAACCAAGAGGTACTCCCCCGAAAAGCGATCCTCCGTCCTCATCACCTAGCTCCGGTAATAATACAGGAGAAATTGTTGGTCTTGCTCTCGCCGGGGTTTTCATCATCGCGTTTCTTGCTCTAGTTATTTTCTTTATGTTCGGGAGGAAGCAAAAGCGTGCGAGTGTCTATGCCATGCCACCCCCTAGGAAATCTCATATGAAAGGAGGAGACGTGCATTACTATGTAGAGGAGCCTGGTTTTGGGAGTGGTGCACTAGGTGCCATGAATTTAAGAACTCCTTCAGAAACGACTCAGCACATGAACACTGGCCAGTTAGTTTTTACCTACGAAAAGGTTGCAGAGATCACGAACGGGTTTGCTAGTGAAAACATAATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGCAGAGTGGGAGCACTCAAATTATTGAAGGCTGGAAGTGGGCAAGGAGAAAGGGAGTTCAGGGCGGAGGTGGACATCATCAGCCGAATCCATCATCGCCATTTGGTGTCATTAATTGGTTATTGCATATCTGAACAGCAAAGAGTGCTTATCTATGAATTCGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAGTAAATGGCCAATTTTGGATTGGCCAAAGAGGATGAAGATAGCAATTGGCTCTGCAAGGGGCCTGGCATATCTCCATGATGGCTGCAACCCAAAGATTATTCACAGAGATATTAAATCAGCAAACATACTTTTGGATAATGCTTATGAGGCACAGGTTGCAGACTTTGGACTTGCCAGGCTAACCGATGATGCTAATACCCACGTATCAACTAGGGTGATGGGGACCTTTGGgtacatggctccagaatatgcaacaagtggaaaattaacagatagatcagatgttttctcttttggagttgtcctccttgagcttataactggaaggaaacctgttgatccaatgcagcccataggagaggagagtttggttgagtggGCTCGTCCACTTCTCCTTCGTGCAGTTGAGACAGGTGACTATGGTAAACTAGTAGACCCCAGGCTTGAGCGGCAATATGTGGACAGTGAAATGTTCAGAATGATTGAGACAGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGACCTCGTATGGTTCAGGTGGCTAGATCCTTAGATAGCGGCAACCAACTATATGATCTATCAAATGGGGTGAAATATGGCCAGAGCACTGTTTATGATTCTGGCCAGTATAATGAAGACATTGAGATATTCAAAAGGATGGTTAATGGCAGCTTTGATGATTCTGAGTTTGATATGAACAGCATGGAATACCGTTCAACTGTTTCAAGAGAAATGTCTGGATCCAGACATTCAAGGATGCCATATAGTGAAGGTAGTGATTCAGATTTTAGAGTTTTCCACGGCCAACGAAGCAATACGCAGAACATGTCTTGA 2061 0.443 MAKNTSSNESSSLNSDKDKASAPLPSSDDSESPKSTPPKSPPPSPPLPPSPPKKSAPPPTESPPAPAHSSPPTPSQSPPPTPPHSPPPSPSPPTPPPEKSPPSPSNSPPPPSTPPPSKDSAPPPSPSEPPPSPPPSPPPPPPQNSPPSPQSLTPPPHSLSPPTAISTPPSPASHVTPPPAPLGSGPNHPSPPRPPPSTQPKPRGTPPKSDPPSSSPSSGNNTGEIVGLALAGVFIIAFLALVIFFMFGRKQKRASVYAMPPPRKSHMKGGDVHYYVEEPGFGSGALGAMNLRTPSETTQHMNTGQLVFTYEKVAEITNGFASENIIGEGGFGYVYKASMPDGRVGALKLLKAGSGQGEREFRAEVDIISRIHHRHLVSLIGYCISEQQRVLIYEFVPNGNLSQHLHGSKWPILDWPKRMKIAIGSARGLAYLHDGCNPKIIHRDIKSANILLDNAYEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPMQPIGEESLVEWARPLLLRAVETGDYGKLVDPRLERQYVDSEMFRMIETAAACVRHSAPKRPRMVQVARSLDSGNQLYDLSNGVKYGQSTVYDSGQYNEDIEIFKRMVNGSFDDSEFDMNSMEYRSTVSREMSGSRHSRMPYSEGSDSDFRVFHGQRSNTQNMS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00284 686 Gene3D Transferase(Phosphotransferase) domain 1 396 608 - -
Gma01g00284 686 MobiDBLite consensus disorder prediction 1 220 - -
Gma01g00284 686 SMART serkin_6 320 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00284 686 MobiDBLite consensus disorder prediction 35 213 - -
Gma01g00284 686 ProSiteProfiles Protein kinase domain profile. 320 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00284 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Gma01g00284 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 64 686 - -
Gma01g00284 686 Gene3D Phosphorylase Kinase; domain 1 286 395 - -
Gma01g00284 686 SUPERFAMILY Protein kinase-like (PK-like) 299 593 IPR011009 -
Gma01g00284 686 Pfam Protein tyrosine and serine/threonine kinase 323 525 IPR001245 GO:0004672|GO:0006468
Gma01g00284 686 MobiDBLite consensus disorder prediction 650 686 - -
Gma01g00284 686 PANTHER RECEPTOR-LIKE KINASE 64 686 - -
Gma01g00284 686 CDD STKc_IRAK 326 594 - -
Gma01g00284 686 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00284 Gma-Chr1 3214668 3219334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00284 172 666 Trihelix Transcription Factor Family AT1G70460 54.528 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma01g00284 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00284 - - gmx:100807815 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00284 01 3214668 3219334 Gma01g00284 01 3214668 3219334 ECH
Gma01g00284 01 3214668 3219334 Gma02g00315 02 3292959 3298104 GST