Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00251 ATGAAAATGACACGGATCTTCCTTACGACCCTTTCATTGTGGCTCTTGGTCCTCGCTCCTTCCAAGGCCGAGGAGGGATTTCCCGACAAACTTCCATCAACATTTCATTCTCTATTTCCGTTTCTCGGTCGTCAAGATGACCTGAACAAGCCACAAAAGGGTCCTAATGACGAGTCTCAACAACAGAACGTGCCTCAACAAGCGGCTGACCAAAATCCTCAGATACTCAGCCAAGATTTCTACATTAAGACTTGCCCTAATGCACAAAAAATCGTGGCCGATGCACTTGCCAAGATTGTTAAGACCAATCCGGGCGCACTCGGAAACTTACTCCGCCTTCAATTCCATGACTGCTTCGTTAATGGATGCGATGCATCCATCTTGCTAGATTACTCGCCAAGTGGCGACGCTGTGGAGAAAAGTTCAATGGTCAATGGTCTACTCCTCAAAGGAGCTGATATGATCGATGAAATAAAGTTGAAGCTGGAGGAGCAGTGTCCTCAAACCGTGTCATGCGCTGACACATTGGCATTTACAGCCAACGAGGTAATGACCATGGCGGGTTTGGCCCCTCAGAAACCCCTCGGTGGCCGTAGAGACGCGCTCGTTTCCCTTGCAACCGCTGCAGAAACCGACAACATCCCTATGCCAAACTGGACCATGGAACAAATGGTAAAACTCTTCAACAAGAAGGGTTTCAACATCGAAGAAATGGTGATCCTACTCGGTGCACACTCGATCGGCATGGCTCATTGCGACTTGTTCATTGAAAGGGCATACAACTTCCAAAACACAGGGAAACCAGACCCTTCCCTTACTGTGGAAGTGCTTGAGGAATTAAGAAAGGCATGCCCTAATCTTAATACACCTAAGTACCGGAACCCCCCAGTGAACTTTGATGCAACACCAACTGTGCTTGATAACCTCTTCTACAAGGATATGGTGGAGAGAAAGAGAACTTTGCTCATTACAGATTCGCATATATTGGAAGATCCTAGGACTTTGCCAATTGTGCAACAGTTTGCACATGACGCTAGCTTGTTCCCCAGGAGATTTCCTGAGGTCATGCTTAAGATGAGTTCTTTGAATGTGCTCACAGGGAATGAAGGTGAGGGCATCACCACCCCCACTCTGCTTCAGCCCAGAGTGCTACTTTACGACGCCGTTTCCCATCTCTGCCACAGAGCAAAACGAAGGTACAAATGGTTTGGTGAGGCTGAAGATTATTTGGTTTTGCAAGAGATGAGTCGAGATCAGGATTCGTAG 1266 0.4747 MKMTRIFLTTLSLWLLVLAPSKAEEGFPDKLPSTFHSLFPFLGRQDDLNKPQKGPNDESQQQNVPQQAADQNPQILSQDFYIKTCPNAQKIVADALAKIVKTNPGALGNLLRLQFHDCFVNGCDASILLDYSPSGDAVEKSSMVNGLLLKGADMIDEIKLKLEEQCPQTVSCADTLAFTANEVMTMAGLAPQKPLGGRRDALVSLATAAETDNIPMPNWTMEQMVKLFNKKGFNIEEMVILLGAHSIGMAHCDLFIERAYNFQNTGKPDPSLTVEVLEELRKACPNLNTPKYRNPPVNFDATPTVLDNLFYKDMVERKRTLLITDSHILEDPRTLPIVQQFAHDASLFPRRFPEVMLKMSSLNVLTGNEGEGITTPTLLQPRVLLYDAVSHLCHRAKRRYKWFGEAEDYLVLQEMSRDQDS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00251 421 Gene3D - 79 371 - -
Gma01g00251 421 PRINTS Plant peroxidase signature 150 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Plant peroxidase signature 109 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Plant peroxidase signature 236 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Plant peroxidase signature 297 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Plant peroxidase signature 354 367 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Plant peroxidase signature 85 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Plant peroxidase signature 169 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 ProSiteProfiles Plant heme peroxidase family profile. 75 371 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 MobiDBLite consensus disorder prediction 54 69 - -
Gma01g00251 421 PRINTS Haem peroxidase superfamily signature 107 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Haem peroxidase superfamily signature 170 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 PRINTS Haem peroxidase superfamily signature 299 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 MobiDBLite consensus disorder prediction 46 69 - -
Gma01g00251 421 PANTHER PEROXIDASE 27 371 - -
Gma01g00251 421 CDD secretory_peroxidase 76 371 IPR033905 GO:0004601|GO:0042744
Gma01g00251 421 Gene3D Peroxidase, domain 2 215 359 - -
Gma01g00251 421 PANTHER PEROXIDASE 25-RELATED 27 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 SUPERFAMILY Heme-dependent peroxidases 76 374 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 Pfam Peroxidase 93 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g00251 421 ProSitePatterns Peroxidases proximal heme-ligand signature. 237 247 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00251 Gma-Chr1 2872866 2880881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00251 76 371 Peroxidase AT4G08770 40.199 7.70e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00251 K00430 - gmx:100802856 733.791