Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00239 ATGTTCGGACCAGCCCAATCCACTTCCGAACCTCCGAAATCCACTCTCAAATTCCTCTGTAGCTACGGCGGCAAAATCCTCCCTCGCTACCCCGACGGCAAGCTCCGCTACCTCGGCGGCCACACCCGCATCCTCGCCGTCGATCGCTCCATTCCATTCTCCGAGCTATTGCTGAAACTGGAGGAGCTCTGCGGCGCCTCCGTGAGGCACCTCCGCTGCCAATTACCCTCCGAAGACCTCGACGCTCTCGTCTCCATAACCTCCGACGAAGATCTCGCAAATCTCATCGAGGAATACGACCGTGTTTCGTCGCTGAAAATCAGAGCCTTCCTCTCGCCGCCCACGCCGCCGAGATCGCCGAACAAGTTTTCCACTGCTCCGTCGAAATCGGCGTCCATCTCCTCCTCCTCCGCTTCGTCATCGTCGTCGTCTTCATCGTATTACAGCCCTACCGGCTCCGGTGAATCTGGCCGGAGATACAGGGCTCCGGCGCTGGTTTCAGACTGCTGCGTACATCAGATGTCGCAGCCGCCGGCGTATCCGGTCGGCATGGAGAAATCGAAATCCTCCGGGAGGAATGTTCCTCTGCCGCGGTACGGTTACCACCACGGGAACGGTGGACACGTTTATCTGATCCACAACGGGAACCACTGGCAACAGCGTTACGGTGTCGTTTAG 678 0.587 MFGPAQSTSEPPKSTLKFLCSYGGKILPRYPDGKLRYLGGHTRILAVDRSIPFSELLLKLEELCGASVRHLRCQLPSEDLDALVSITSDEDLANLIEEYDRVSSLKIRAFLSPPTPPRSPNKFSTAPSKSASISSSSASSSSSSSSYYSPTGSGESGRRYRAPALVSDCCVHQMSQPPAYPVGMEKSKSSGRNVPLPRYGYHHGNGGHVYLIHNGNHWQQRYGVV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00239 225 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 8 218 - -
Gma01g00239 225 Gene3D - 34 112 - -
Gma01g00239 225 PANTHER OS05G0427100 PROTEIN-RELATED 8 218 - -
Gma01g00239 225 MobiDBLite consensus disorder prediction 122 136 - -
Gma01g00239 225 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Gma01g00239 225 MobiDBLite consensus disorder prediction 116 136 - -
Gma01g00239 225 SMART PB1_new 30 114 IPR000270 GO:0005515
Gma01g00239 225 SUPERFAMILY CAD & PB1 domains 32 117 - -
Gma01g00239 225 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00239 Gma-Chr1 2753774 2756511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00239 16 225 MAP Kinase Kinase Kinase AT5G57610 34.375 2.52e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00239 - - gmx:100810685 398.667