Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00215 ATGACTCTTCCTGGTTCCCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGACTGCAATAAGCATTCGAGGGCCATGGGACGTGGCAAGTTACATTTATTTAGTGCAGGTCCTTCATATCCTATTTTGTTCATGAGACAGGAAGGCAGGGGTTTTCAACACCTTCGTCATATAAACAGGCCAACACATACATTATCTTGCAAATCCCACTCTTTTAAGTGTCATTGTTTTTTAGTGTCAGGTCAACCAAATAATCTTCCTGCTGTTAAGGTGGCTGCTACTGTGTTGGCTAGGTCTTGTAATGTATTGCAAAATAGTCCTATCATAGTAAAGTTGATTCCTGCAGTTGGCGTTATCATTTTTGCAATATGGGGTGTTGGTCCATTATTGTTTCAGACAAGGAAATTACTTTTTCAGAGGAGTGATAGTAGTTGGAAGAAAAGTACCACTTACTATATAGTAGCTTCTTACCTTCAGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGAGCACTGGAGCCATTAATCCTACCTTCAGAAACTAGCCAGATTGTTAAGGAACGGCTTTTGAATTTTGTAAGATCATTATCAACAGTACTGGCCTTTGCCTATTGTTTGTCAAGTGTAATTCAACAAGTGCAGAAATTCTTAGCCGAGAGTACTGATGCAAGTGAGGCGAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTACTCTGCGGTATGGATAGCTGCCTTTTCACTGTTTATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTGATGATTCATGCAACCCGACCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACAGTCGAGCATGTTGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCAATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCCGACATGAGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCACTTTTGATTCTGGTGTCTTGTTTTGTTAAGACCTCACATTTTGAAGAATATCTGTGTGTTAAGGAAGCTATACTGTTAGATCTTCTTAGAGTTATTGGCCATCACCGAGCCCGACTTGCCACACCGGTCCGTACCCTGCAGAAAATATACAGTGATGCTGACTTGGAGAACATACCATTTGCAGATTCGACATTTGGTCATGGTGCTGGGACAGTACCTCACCGTCCATTATTAGTGATTGAACCATCTTACAAGATCAATGGAGATGATAAGAAAAGTCGAGCTGCACGGCCAGCTGTTGATCAAGATAACAAGACAGCTACGCAAACCAAAGTTGACACCAAGACACACAACGTGGCTAGAGGAACCCAGGATGACACTGAGGGGGATAACAAAGTTTTGACACCTAACTCTGATGCAAATGGAAACTCTAAGACAGTTGTGACACCCAAACCTGATCCTGAAGTGGGTGAAAACAAGCCATTGAAATCAGATTCAAACAAGGAGAACGTGGAGGTGCCAGAATCTCCTTCTAAATCCAAAGTTACTGGTTTGGTAGTGGATAATTCAGCCCAGAAGGACGTAGATGTCAAACAATCCAAGGTTCAGATCACTAAAAACATAAAGCCAAATATTGACTCTGACAATGTAGTGTCCTCCTCAACTAACAATGCTGACAAAATTGGTGGATTTAATACGAATATGCCAATGAAACAGCAAGGGGAAAAGAAACCTGCTGCACAGGCTCATGCATCCAGGACTGTTCTGGAAGAGAATATAGTTCTAGGTGTTGCATTGGAGGGATCAAAGAGAACACTTCCCATTGATGAGGAGATTGACAATGTGACATGTCGAGAGGCAAAGGAAATGGCTGCTTTGCAGGGTGGAAATGGATCTCCAAAGGCTTCAGATGGAAATGACAAGTAG 2160 0.4181 MTLPGSLQLSHGLGLCRNLDCNKHSRAMGRGKLHLFSAGPSYPILFMRQEGRGFQHLRHINRPTHTLSCKSHSFKCHCFLVSGQPNNLPAVKVAATVLARSCNVLQNSPIIVKLIPAVGVIIFAIWGVGPLLFQTRKLLFQRSDSSWKKSTTYYIVASYLQPLLLWTGAILICRALEPLILPSETSQIVKERLLNFVRSLSTVLAFAYCLSSVIQQVQKFLAESTDASEARNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFADSTFGHGAGTVPHRPLLVIEPSYKINGDDKKSRAARPAVDQDNKTATQTKVDTKTHNVARGTQDDTEGDNKVLTPNSDANGNSKTVVTPKPDPEVGENKPLKSDSNKENVEVPESPSKSKVTGLVVDNSAQKDVDVKQSKVQITKNIKPNIDSDNVVSSSTNNADKIGGFNTNMPMKQQGEKKPAAQAHASRTVLEENIVLGVALEGSKRTLPIDEEIDNVTCREAKEMAALQGGNGSPKASDGNDK 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00215 719 Pfam Mechanosensitive ion channel 240 446 IPR006685 GO:0016020|GO:0055085
Gma01g00215 719 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Gma01g00215 719 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 719 - -
Gma01g00215 719 Gene3D - 193 297 - -
Gma01g00215 719 MobiDBLite consensus disorder prediction 540 559 - -
Gma01g00215 719 MobiDBLite consensus disorder prediction 567 586 - -
Gma01g00215 719 MobiDBLite consensus disorder prediction 500 598 - -
Gma01g00215 719 MobiDBLite consensus disorder prediction 513 528 - -
Gma01g00215 719 Gene3D - 299 354 IPR023408 -
Gma01g00215 719 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 719 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00215 Gma-Chr1 2375244 2382704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00215 9 719 Mechanosensitive Ion Channel Family AT5G10490 56.432 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00215 K22047 - gmx:100789444 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00215 01 2375244 2382704 Gma09g01846 09 44085054 44091095 GST