Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00207 ATGGCAACCACGGATAATCACGTGAAAGAGTTTACGATCGACGACGAGTCATCGCCGAGGGCGATTCTGGAAACCCCTGTTTCGGGAACAGAGTCCGACAACAGTGGAAGCAGCGAAAGCTTCAGTTCCGTCTCGCCGGAGAAGTCGCCGGCGGTGACCGGAAAAGAGGTCCCCAAGGAAGGTTACGTGCAACAGTTGAAGTCCATGATCGACGTTTTCAAGTTCAAGTCTGTGAGAAAGTTAACAGCCGTTCCTCTGCTTTCGGTGGGCCATGATATCTCTCGGAAAGGGTTCACCAAAAAACTTGCTCGTATTCGAAGTGCTGAAGATAGTATTGATATTGGAGCTTTTCCCACGAAACCCTCTTGGAGGAACTTCGATTATGAAGAGTTAGCTGCTGCTACTGGTAATTTTAGTTATGAGAACTTGATTGGAAAAGGTGGTCACGCTGAAGTGTACAAAGGCTACTTACCCGATGGTCAGGTTATAGCTGTAAAGAGGCTAATGAAGAATGAAAAGGATGCTGCAGACAGAGCTGGTGATTTCTTGACGGAGCTTGGGATCATAGCACACATAAACCACCCAAATGCGACGCGCCTTGTTGGTTTTGGGGTTGATTGTGGCCTATACTTTGTCCTACAGCTTGCTCCACATGGCAGTCTTTCTTCTTTGCTTTTTGGTTCTGAATGCTTGGACTGGAAGATAAGATTCAAGGTAGCTATTGGGGTGGCAGAGGGATTGCATTATCTCCATAAAGAGTGCCCGAGACGAATCATTCATAGGGACATCAAGGCCTCCAATATATTACTAAACGAAAACTTCGAAGCTGAGATATCCGATTTTGGACTGGCAAAGTGGCTCCCAAGTAAGTGGACAAACCACGTTGTCTTCCCAATAGAAGGAACATTTGGATATTTGGCCCCAGAGTACTTTATGCATGGAGTTGTGGATGAGAAAACTGATGTATTTGCTTTTGGAGTTTTGCTGTTGGAGCTCATAACAGGTCGCCGTGCTGTTGATTCGAATAGTAGACAAAGTCTTGTCATCTGGGCAAAGCCACTGCTGGACACAAACAATGTAAAGGATTTAGCAGACCCCAGATTAGGAGAGGAATATGATCTTACTGAAATGAAGCGCACCATGTTGACGGCTTCCATGTGTGTCCACCATGCATCCTCCAAGCGGCCATACATGAATCAGGTTGTGCTTCTACTAAAGGGTGAAGAGACAATTATAGAACCAAAGAAAAATTTAGTTGCACAGAAATCTCTCATGTTAGAGGCATGTGACCTAGAAGATTATACTTGCTCAAGTTACTTGAAGGACCTCAATCGCCACAGGCAATTAATCATGGAGTAA 1359 0.4525 MATTDNHVKEFTIDDESSPRAILETPVSGTESDNSGSSESFSSVSPEKSPAVTGKEVPKEGYVQQLKSMIDVFKFKSVRKLTAVPLLSVGHDISRKGFTKKLARIRSAEDSIDIGAFPTKPSWRNFDYEELAAATGNFSYENLIGKGGHAEVYKGYLPDGQVIAVKRLMKNEKDAADRAGDFLTELGIIAHINHPNATRLVGFGVDCGLYFVLQLAPHGSLSSLLFGSECLDWKIRFKVAIGVAEGLHYLHKECPRRIIHRDIKASNILLNENFEAEISDFGLAKWLPSKWTNHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLELITGRRAVDSNSRQSLVIWAKPLLDTNNVKDLADPRLGEEYDLTEMKRTMLTASMCVHHASSKRPYMNQVVLLLKGEETIIEPKKNLVAQKSLMLEACDLEDYTCSSYLKDLNRHRQLIME 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00207 452 MobiDBLite consensus disorder prediction 23 49 - -
Gma01g00207 452 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 5 452 - -
Gma01g00207 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Gma01g00207 452 PANTHER OS08G0249100 PROTEIN 5 452 - -
Gma01g00207 452 SUPERFAMILY Protein kinase-like (PK-like) 119 405 IPR011009 -
Gma01g00207 452 Pfam Protein kinase domain 140 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00207 452 Gene3D Phosphorylase Kinase; domain 1 115 212 - -
Gma01g00207 452 Gene3D Transferase(Phosphotransferase) domain 1 217 423 - -
Gma01g00207 452 SMART serkin_6 138 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00207 452 MobiDBLite consensus disorder prediction 1 56 - -
Gma01g00207 452 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Gma01g00207 452 ProSiteProfiles Protein kinase domain profile. 138 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00207 Gma-Chr1 2277158 2282496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00207 126 401 Trihelix Transcription Factor Family AT1G68690 46.622 6.54e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma01g00207 Pkinase 3.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00207 - - gmx:100818314 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00207 01 2277158 2282496 Gma09g01854 09 44162833 44167686 GST