Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00197 ATGGATCCGACTCAATCGAACGACGTTCAGCAATACCCACAAACCCTAATCTCAGAGCCTAAAGATTCTTCAATGCACGACGCCAACGAGTCCTTGTTCGATTCGATGGTTTGCGACTCCAGTTCAAGACTGGTCCCAACTGGGCTTACGAGATCTGGCAACGCAGCAGAAGAGGAGTGTTTCATGTTTGTAAATGCGGGAGGGGATGCTTTTAGTGAAGCAGCTGGTGGAATAACGTTCCTGGGTGACACCTATTTTGATGGTGGCAACGTTATGCGTACCAATGAGCAAATAGTGGAGGGTGGAGACTACCCATTTATCTACCAATCAGCTCGGTTGGGAAGCTTTTGTTATAGGTTTGCTAATCTTCCTCCTGGAGACTACGTTGTTGATCTTCATTTTGTGGAGATCATTAACATAAATGGGCCAAAAGGAATGAGGGTGTTCAATGTATACATCCAAGATGAAAAGGCATGTTTTTCTGTTCTATCTGAATTGGATATCTATGCAGTTGTTGGAGCCAATAAGCCATTACAGATGGTTGATTCAAGGGTGTCTGTTAAGGATGATGGGGTTATTCTCATAAGATTTGAAAGTATATCTGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGAAGAGCAACGAAGGCGTCAGTTCCACAAGTGACAAGTGATTACATTAAATGTAGCTCCTGTGCTGCACAGATTGAAATTCCTTCATCACAGATGAAAGTTATGCAGGCAAAGTCTACAGCAAAGTACAAGAGCAAGATAAAAGAGCTCACAATGCAGTGCGATCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACAGCAAAAAATGAGCAATTGGAGGCAGTCCAGATGGAACTTGACAAAGTGACATTTAAGTTACTCACAACTGATCAAACTGTAGAGAAACAAGCTGAAAGCCTGAGGAATATTTCTAATAGGTATGAGCTTGATAAGAAGAAATGGGCAGAAGCAATTAACAGTTTACAAGAAAAAATTAAGTTGATGAAGAGTGATTATTCAAAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCAATCCCCGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAGCGAAGAGATGGCAAAGAGAAAGAAACTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGTCGATGTCGTCCATTGAATAAGGCTGAAATCTCAGCTGGAAGCAATACAGTTGTGGATTTTGATGCAGCAAAGGAAGGTTGCCTTGGAATTTTGACAAGTGGCTCCACCAAAAAATCTTTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTACTGGATGGCTACAATGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGGAAGACATTCACCATGGAAGGAACACAGCAGAATAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGAAACATTTTCATATGACATATCTGTTAGTGTGATAGAGGTTTACAATGAACAAATCAGAGACTTATTGGCTACAGGACAAACATCAAAGCGGTTGGAGATAAAACAAGCTTCTGAAGGATTTCATCATGTTCCTGGTGTTGTAGAAGCCAGGATTGATAACATAAATGAAGTGTGGAATGTACTGCAGGTCGGAAATAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCACTGCCTGCTTTGTGTAACAGTAAAGGCTAAAAATTTGTTGAGTGGCGAATCTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAACGGCTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCCCTTGGAGATGTAATATCCGCTTTAGCAGCGAAAAGTAGTCACATTCCATATAGGAACTCTAAACTGACACATTTACTTCAAGACTCACTAGGAGGTGACTCCAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGACGTAGGTGAGACACTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAAGTTCAAAAGATGAAAGCAATGCTTGAAAAAGCACGGAGTGAGTGCAGAATTAAAGATGAATCTATGCGAAAACTTGAAGAAAATTTGCAAAGCTTGGAGAGTAAGGCCAAAGGCAAGGATCAAATTTACAAAAATCTACAAGAAAAGATTCAAGAACTTGAGGGACAGATTGAGTTGAAAAGAGCCATGCAAAATGACTCAGAGAAAAAAATCTCTCAATTATCTGCCAAATTGAGAGGGAAAGAAGAAACCTGCGGTACTCTTCAACAAAAGGTGAAAGAGCTAGAGAAAAAGATGAAAGAACAACTGCAGTCAGAGTCAGCAAGTTTTCAACAGAAGGTTTGGGATCTAGAGAAAAAACTGGAAGATCAGATGCAAGGGTCTGAGTCTGAATCTGCCATTTTGAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAACAAAGCTCAATGTCCTTGCTTCGTCAACAGATGAAGGAACTGGAGGACAGGTACCGAGAGCGAGAGCAACAGTGGCAACAAACTCATTCTTTTGTGGATGCAGTAAAAGCAGCCACACCAGATGTATGTAAAAGCTGCATGAGGGAAGAATGTCCAAGTGAGATTGAGACTGGCATTTTAAGGTGTTCAGACTCGGTAAACCGCCAGATAAGTCAAGGTTCTTCTTTGTTCAAAGGGAATGATTCCACTCATAAGATAAGCCAAGGTTCTTTGTTCAAAGAGAATGATTCCACTCATAAGATAAGAAGCAAAAGAAGCAATGATGAAAACAACTTTGTCATGCCATCATCATTATTACATGATAGAAGAGTCGCAAGGAAATCTGATCCACCAAAAATAGTAAGGGGTGTGAGGCCAACACCAAGGCCAGTCACTGCTAATCCAGCCCCAGTGTCTCACAAGAGAGGTAGCACAAGCAGAGATCAGGTTCAAGGAATCAAAGAGAGGGACACTAAGAAGAAAATTTGGTCAAGATAG 3204 0.407 MDPTQSNDVQQYPQTLISEPKDSSMHDANESLFDSMVCDSSSRLVPTGLTRSGNAAEEECFMFVNAGGDAFSEAAGGITFLGDTYFDGGNVMRTNEQIVEGGDYPFIYQSARLGSFCYRFANLPPGDYVVDLHFVEIININGPKGMRVFNVYIQDEKACFSVLSELDIYAVVGANKPLQMVDSRVSVKDDGVILIRFESISGSPVVSGICIRRATKASVPQVTSDYIKCSSCAAQIEIPSSQMKVMQAKSTAKYKSKIKELTMQCDLKAKECYEAWMSLTAKNEQLEAVQMELDKVTFKLLTTDQTVEKQAESLRNISNRYELDKKKWAEAINSLQEKIKLMKSDYSKLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYSEEMAKRKKLFNEVQEAKGNIRVFCRCRPLNKAEISAGSNTVVDFDAAKEGCLGILTSGSTKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLEHLFKVSKERSETFSYDISVSVIEVYNEQIRDLLATGQTSKRLEIKQASEGFHHVPGVVEARIDNINEVWNVLQVGNNARAVGSNNVNEHSSRSHCLLCVTVKAKNLLSGESTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSEVQKMKAMLEKARSECRIKDESMRKLEENLQSLESKAKGKDQIYKNLQEKIQELEGQIELKRAMQNDSEKKISQLSAKLRGKEETCGTLQQKVKELEKKMKEQLQSESASFQQKVWDLEKKLEDQMQGSESESAILKDKIKELERKLKEQEQSSMSLLRQQMKELEDRYREREQQWQQTHSFVDAVKAATPDVCKSCMREECPSEIETGILRCSDSVNRQISQGSSLFKGNDSTHKISQGSLFKENDSTHKIRSKRSNDENNFVMPSSLLHDRRVARKSDPPKIVRGVRPTPRPVTANPAPVSHKRGSTSRDQVQGIKERDTKKKIWSR 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00197 1067 CDD KISc_C_terminal 402 728 - -
Gma01g00197 1067 Coils Coil 318 345 - -
Gma01g00197 1067 MobiDBLite consensus disorder prediction 962 1067 - -
Gma01g00197 1067 Pfam Malectin domain 63 209 IPR021720 -
Gma01g00197 1067 MobiDBLite consensus disorder prediction 962 983 - -
Gma01g00197 1067 ProSiteProfiles Kinesin motor domain profile. 404 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g00197 1067 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 1055 - -
Gma01g00197 1067 MobiDBLite consensus disorder prediction 1049 1067 - -
Gma01g00197 1067 ProSitePatterns Kinesin motor domain signature. 626 637 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma01g00197 1067 Coils Coil 370 390 - -
Gma01g00197 1067 Coils Coil 747 809 - -
Gma01g00197 1067 MobiDBLite consensus disorder prediction 1 24 - -
Gma01g00197 1067 Gene3D Kinesin motor domain 349 728 IPR036961 -
Gma01g00197 1067 SUPERFAMILY Tropomyosin 732 919 - -
Gma01g00197 1067 SMART kinesin_4 402 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g00197 1067 PANTHER KINESIN-LIKE PROTEIN KIN-14R 27 1055 - -
Gma01g00197 1067 Gene3D - 56 217 - -
Gma01g00197 1067 MobiDBLite consensus disorder prediction 1 22 - -
Gma01g00197 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 404 762 IPR027417 -
Gma01g00197 1067 Pfam Kinesin motor domain 410 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g00197 1067 PRINTS Kinesin heavy chain signature 627 645 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g00197 1067 PRINTS Kinesin heavy chain signature 478 499 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g00197 1067 PRINTS Kinesin heavy chain signature 676 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g00197 1067 PRINTS Kinesin heavy chain signature 596 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g00197 1067 Coils Coil 817 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00197 Gma-Chr1 2189287 2195245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00197 376 780 Calmodulin-binding Proteins AT5G65930 40.640 1.92e-85 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00197 K10406 - gmx:100782704 2039.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00197 01 2189287 2195245 Gma09g01863 09 44231521 44237542 GST