Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00195 ATGCTGTTGAGCAATGAATGGACTCTCTCACCTTTTCCGAAAATTGATTTAATGGAAACTGGTGGAAAAGATGTGGCATTCAAAGTGTTGTATTGTGGGGTGTGTCACTTTGACCTCCACATGGTGAAGAACGAATGGGGCTTTTCCAACTATCCACTAGTCCCCGGGCATGAGGTAGTTGGTGTAGTGAAAGAGGTTGGAAGCAAGGTAGAAAACTTCAAAGTTGGGGACAAGGTTGGTGTAGGATGCTTGGTTGATTCCTGCCGCACCTGCCAGAACTGTTGTGACATTCTTGAGGATTATTGTCCACAATTTACGCTCACATATGGTGCAAAGCATAAAGATGACACCATCACATATGGAGGCTACTCTGACTCAATGGTTGCTGATGAGCATTTTGTGATTCGCATTCCTGATAGCTTACCACTTGATGCTGCTGCAACTCTTCTTTGTGCTGGCATCACTGTGTATAGCCCTCTCAGATATTGCACTAGACAAGCCTGGTTTACATGCGGGTGTGGTTGGTCTTGCTGGACTAGGCCACACGGTTGTCGAGTTTACCAAAGCTTTTGGTGCTAA 579 0.456 MLLSNEWTLSPFPKIDLMETGGKDVAFKVLYCGVCHFDLHMVKNEWGFSNYPLVPGHEVVGVVKEVGSKVENFKVGDKVGVGCLVDSCRTCQNCCDILEDYCPQFTLTYGAKHKDDTITYGGYSDSMVADEHFVIRIPDSLPLDAAATLLCAGITVYSPLRYCTRQAWFTCGCGWSCWTRPHGCRVYQSFWC 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00195 192 Pfam Alcohol dehydrogenase GroES-like domain 23 136 IPR013154 -
Gma01g00195 192 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 56 70 IPR002328 GO:0008270|GO:0016491
Gma01g00195 192 SUPERFAMILY GroES-like 15 163 IPR011032 -
Gma01g00195 192 PANTHER ALDEHYDE REDUCTASE 9 166 - -
Gma01g00195 192 Gene3D - 152 164 - -
Gma01g00195 192 Gene3D - 14 151 - -
Gma01g00195 192 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 9 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00195 Gma-Chr1 2167401 2168738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00195 5 162 Monolignol Biosynthesis Gene Families AT4G37990 68.354 3.96e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00195 - - var:108320064 241.891