Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00194 ATGGCAGCACAAGCTGAAATTGAGCATCCTAGGAAAGCATTCGGATGGGCAGCTAGGGATTCTTCCGGTCTTCTCTCCCCTTTCAATTTCTGCAGAAGGGAACCCGGTGAGAAAGATGTGGCATTCAGAGTGTTGTACTGTGGGATATGCCACTCGGACCTCCACAGCATAAAGAACGAATGGGGTACTTCCATCTATCCAATGGTTCCTGGGCATGAGGTAGCTGGTGTAGTAACAGAGGTGGGAAGCAAAGTAGAGAAGTTCAAAGTTGGGGACAAGGTTGGTGTGGGATGCCTGGTTGATTCCTGCCGCACCTGCCAAAACTGTTGTGACAATCTTGAGAATTATTGTCCTCAATCTACGTTCACATATGGTGCCAAATATAGAGATGGAACCATCACATATGGAGGCTACTCTGACTCAATGGTTGCTGATGAGCATTTTGTGGTTCGCATTCCAGATAGATTACCACTTGATGCTGCTGCACCTCTTCTTTGTGCTGGCATCACTGTGTATAGCCCTCTCAGATATTATGGACTTGACAAGCCTGGTCTGCATGTGGGTGTGGTTGGTCTTGGTGGACTAGGCCATATGGCTGTCAAGTTTGCCAAAGCTTTTGGTGCTAAGGTCACAGTAATAAGTACTTCACCAAACAAAAAGGAAGAAgcaatacaaaatcttggagctgattcctttctaataagccgggaccaagatcagatgcaggctgcaatgggtactttggatggtattattgacacagtttctgccgttcatcctctcttacctctcattggtttgctcaagtctcatggaaagcttgtaatggttggtgcaccggagaagcctctggaactgcctgtttttcctttacttgcggggagaaagatagttgctggcactctgattggagggctaatggagacgcaagaaatgattgattttgcagcgaaacacaaTGTGAAACCTGACATTGAAGTCATTCCTATGGACTATGTCAACACAGCAATGGAGCGCCTCCTTAAAGCAGATGTTAAATATCGATTTGTTATTGATATTGGAAACACACTGAAATTCTGA 1080 0.3306 MAAQAEIEHPRKAFGWAARDSSGLLSPFNFCRREPGEKDVAFRVLYCGICHSDLHSIKNEWGTSIYPMVPGHEVAGVVTEVGSKVEKFKVGDKVGVGCLVDSCRTCQNCCDNLENYCPQSTFTYGAKYRDGTITYGGYSDSMVADEHFVVRIPDRLPLDAAAPLLCAGITVYSPLRYYGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKEEAIQNLGADSFLISRDQDQMQAAMGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLAGRKIVAGTLIGGLMETQEMIDFAAKHNVKPDIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTLKF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00194 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Gma01g00194 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Gma01g00194 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Gma01g00194 359 Gene3D - 16 353 - -
Gma01g00194 359 SUPERFAMILY GroES-like 21 184 IPR011032 -
Gma01g00194 359 Gene3D - 167 323 - -
Gma01g00194 359 CDD CAD1 14 352 - -
Gma01g00194 359 PANTHER ALDEHYDE REDUCTASE 1 358 - -
Gma01g00194 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Gma01g00194 359 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Gma01g00194 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00194 Gma-Chr1 2161532 2164331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00194 11 358 Monolignol Biosynthesis Gene Families AT4G37990 72.701 6.78e-178 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00194 - K23232 gmx:100816901 695.271