Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00193 ATGGCGTCGTCACAACCAGAGATGGAGCATCCAAAGAAGGTTTTTGGTTGGGCTGCTCGGGACTCATCTGGGCTTCTCTCCCCATTCAACTTCTCCAGAAGAGAAACGGGGGAGAAAGATTTGGTATTCAAAGTGCAATACTGTGGAATATGCCACTCAGATCTACATATGTTAAAGAACGAGTGGGGCAACACAACCTATCCTCTGGTTCCTGGGCACGAGATTGCTGGTGTGGTAACAGAAGTTGGAAGCAAGGTGCAAAAGTTCAAAGTTGGAGACCGGGTAGGTGTGGGGTGCATGATTGGATCCTGTCGTTCATGTGAAAGCTGTGATGAAAATCTTGAGAATTACTGCCCCAAAATGATTCTCACATACGGTGTCAAGTATTTTGATGGCACCATAACACATGGAGGCTACTCTGACTTGATGGTTGCGGATGAACACTTTGTGGTTAGAATTCCGGATAACCTACCACTTGATGCTGCTGCTCCTCTCCTCTGTGCTGGGATCACTGTGTATAGCCCTTTGAGATACTATGGACTTGACAAGCCTGGTCTGAATCTTGGTGTGGTTGGTCTTGGTGGACTTGGTCACATGGCTGTCAAGTTTGCCAAAGCTCTTGGAGCTAATGTCACAGTGATTAGCACATCTCCTAACAAAAAGAAGGAAGCCATTGAGAACATAGGAGCTGACTCATTTGTGGTTAGCCGTGAACAAGATCAGATGCAGGCTGTAATGGGAACCATGGATGGTATCATTGACACAGTTTCTGCTGTCCATCCTCTTGTGCCTTTGATTGGCCTGTTGAAGCCTCATGGTAAACTAGTCATGGTTGGTGCACCAGAGAAGCCTTTGGAGTTGCCAGTATTTTCTTTACTTATGGGGAGGAAAATGGTTGGTGGCAGTAGCATCGGAGGGATGAAAGAGACGCAAGAAATGATTGATTTTGCTGCTAAGCATGGAGTGAAGCCTGATATTGAGGTTATTCCCATAGATTATGTGAACACTGCAATAGAGCGCCTCGCCAAAGCAGATGTGAAATATCGATTTGTAATTGACATTGGAAACACGTTGAAGCCAAGCTCTTGA 1089 0.4582 MASSQPEMEHPKKVFGWAARDSSGLLSPFNFSRRETGEKDLVFKVQYCGICHSDLHMLKNEWGNTTYPLVPGHEIAGVVTEVGSKVQKFKVGDRVGVGCMIGSCRSCESCDENLENYCPKMILTYGVKYFDGTITHGGYSDLMVADEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRYYGLDKPGLNLGVVGLGGLGHMAVKFAKALGANVTVISTSPNKKKEAIENIGADSFVVSREQDQMQAVMGTMDGIIDTVSAVHPLVPLIGLLKPHGKLVMVGAPEKPLELPVFSLLMGRKMVGGSSIGGMKETQEMIDFAAKHGVKPDIEVIPIDYVNTAIERLAKADVKYRFVIDIGNTLKPSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00193 362 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Gma01g00193 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Gma01g00193 362 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Gma01g00193 362 PANTHER ALDEHYDE REDUCTASE 4 361 - -
Gma01g00193 362 SUPERFAMILY GroES-like 21 185 IPR011032 -
Gma01g00193 362 SMART PKS_ER_names_mod 24 352 IPR020843 GO:0016491
Gma01g00193 362 Gene3D - 17 354 - -
Gma01g00193 362 CDD CAD1 15 353 - -
Gma01g00193 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
Gma01g00193 362 Gene3D - 168 324 - -
Gma01g00193 362 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 4 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00193 Gma-Chr1 2143844 2148619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00193 12 361 Monolignol Biosynthesis Gene Families AT4G37990 72.286 1.81e-177 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00193 - K23232 gmx:100809071 708.753