Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00185 ATGATGGAGTTACCAGATATTTGGATATTAAGACTGGTTGTGGCATGTGTTTTTTGTCTGCTTATATTTATCAGATCGGCTTCTGGCTCTGCAACTGAAGGCTTTGAAAACATAGCATGCTGTGCTGATTCAAACTACACAGATCCCCAAACCACCTTAAATTACACAACAGATTACAGATGGTTCCCTGATAAAGGAAGTTGCAGAAGAACTAAAGATGTGTTAAATGAAAAAGTTCGACTGTTTTTTGTAGATGAAGGAAAGAGATGTTACAACTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTCAACGGTGTAAATTCTTCCTTTAATGTCTCAATTGGGGTAACACAGTTAGGTGCAGTGAGATCATCCGGGCTCCAGGACTTGGAAATTGAGGGAATTTTCAGAGCTACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTGGATCCCTTTATTTCTCAACTTGAATTAAGGCCATTGCCTGAAGAGTATCTACATGATTTGCCTGCCAGTGTTTTAAAACTGATAAGCAGAAATAGTTTTTGGGGCACAAAAGATGAAATAAGGTTCCCAACCGACCCAAGTGATAGAATCTGGAAAGCAACTTCAAGTTCATTATCTGCTCTTCTATTGTCTTCCAATGTCAGCAATTTTGACCTCAAATCCAATGTGACACCACCTCTACAAGTCCTCCAAACAGCTGTTACCCACCCTGACCGATTACAGTTCGTCCTCAGTGGCCTTGACATTGAGGATAATGAATATCGTGTATTTCTCTACTTCCTAGAATTAAATAGCACTGTCAAAGCAGGCAAAAGGGTGTTTGACATCTATGTTAATGGTGAGATTAAAAAGGAGAGATTTGATATATTGGCTGGAGGGTCCAACTACACATACACTGTCTTGAATGTTTCAGCAAATGGATTACTTAATCTAACCTTGGTCAAGGCCTCTGGAGCTGAGTTTGGACCCCTTTTGAATGCTTATGAGGTCCTGCAGATGCGATCATGGATTGAAGAGACCAACCAAAAGGATGTGGAAGGGATTCAGAAGATTAGAGAAGAATTGCTGTTGCAAAACCAAGACAATAAAGCACTAGAGAGTTGGACTGGAGACCCTTGTTTTTTCCCCTGGCAAGGAATAACATGTGACGGTTCAAATGGTTCGTCTGTTATCACTAAGCTGGATCTGTCTGCACGAAATTTCAAAGGACAAATTCCTTCCAGTATCACTGAGATGACCAACTTAAAACTACTAAACCTGAGCCACAACGATTTCAATGGTTATATCCCCTCGTTTCCACTGTCCTCCCTGTTGATATCAATAGATTTGAGCTACAATGATCTTATGGGATCACTTCCAGAATCAATCGTCTCACTGCCACATCTAAAATCGTTGTATTTTGGCTGCAACAAACGCATGAGCAAAGAGGATCCAGCAAATTTGAACAGTTCACCAATCAATACTGACTATGGAAGATGCAAAGGAAAAGAACCTAGATTTGGACAAGTATTCGTCATTGGTGCTATTACATGTGGATCACTTTTGATTACTTTGGCCGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACTTAATGGAAACAAATGTAATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAAACATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGGTACAAAACTTTGATTGGAGAAGGAGGATTTGGTTCTGTTTACCGTGGCACTCTAAACGACGGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACATCAACTCAGGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAATACAGCATGAGAACCTGGTGCCTCTTCTTGGTTACTGTAACGAAAATGATCAACAAATTCTCATGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGTAAACATTCCAAAATCCTTTCAGCTTATTTGTTTTGGTACCCATTAATTCTAAAATTCAACTTTACAACAGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTGTCTATTGCTCTTGCAGGTTTGGCATATCTTCATACATTTCCAGGACGTTCAGTAATACACAGGGACGTGAAATCAAGCAATATACTTCTAGATCATAGCATGTGTGCTAAGGTTGCCGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCTGAGTACTACAAAACCCAGCAATTGTCTGAGAAGAGTGATGTTTTCAGCTTTGGCGTGGTTTTACTTGAAATTGTGAGCGGCAGGGAACCTCTCGACATAAAGAGGCCACGGAACGAGTGGAGCTTGGTTGAATGGGCTAAGCCATACATTAGAGTATCAAAGATGGATGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTAGTGGAAGTAGCCCTGCAATGTCTTGAACCCTTCTCAGCATATAGACCAAACATGGTTGACATTGTCCGGGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAATACATGAAGTCAATAGACAGCCTTGGAGGATCCAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTTCATCAACAGCAGAATCAACCATCACAACCCAAGCCTTGTCCCACCCACAGCCAAGATAG 2823 0.4095 MMELPDIWILRLVVACVFCLLIFIRSASGSATEGFENIACCADSNYTDPQTTLNYTTDYRWFPDKGSCRRTKDVLNEKVRLFFVDEGKRCYNLPTIKNKVYLIRGTFPFNGVNSSFNVSIGVTQLGAVRSSGLQDLEIEGIFRATKDYIDFCLVKGEVDPFISQLELRPLPEEYLHDLPASVLKLISRNSFWGTKDEIRFPTDPSDRIWKATSSSLSALLLSSNVSNFDLKSNVTPPLQVLQTAVTHPDRLQFVLSGLDIEDNEYRVFLYFLELNSTVKAGKRVFDIYVNGEIKKERFDILAGGSNYTYTVLNVSANGLLNLTLVKASGAEFGPLLNAYEVLQMRSWIEETNQKDVEGIQKIREELLLQNQDNKALESWTGDPCFFPWQGITCDGSNGSSVITKLDLSARNFKGQIPSSITEMTNLKLLNLSHNDFNGYIPSFPLSSLLISIDLSYNDLMGSLPESIVSLPHLKSLYFGCNKRMSKEDPANLNSSPINTDYGRCKGKEPRFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLIKSVSIQTFTLEDIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILMYPFMSNGSLQDRLYGKHSKILSAYLFWYPLILKFNFTTGEPAKRKILDWPTRLSIALAGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLVEWAKPYIRVSKMDEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSAYRPNMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALSHPQPR 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00185 940 Pfam Malectin-like domain 42 343 IPR024788 -
Gma01g00185 940 PANTHER OS07G0107800 PROTEIN-RELATED 82 901 - -
Gma01g00185 940 Pfam Leucine rich repeat N-terminal domain 354 394 IPR013210 -
Gma01g00185 940 Pfam Protein tyrosine and serine/threonine kinase 594 883 IPR001245 GO:0004672|GO:0006468
Gma01g00185 940 SUPERFAMILY Protein kinase-like (PK-like) 571 883 IPR011009 -
Gma01g00185 940 Gene3D Transferase(Phosphotransferase) domain 1 666 903 - -
Gma01g00185 940 CDD STKc_IRAK 596 884 - -
Gma01g00185 940 ProSiteProfiles Protein kinase domain profile. 590 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00185 940 Gene3D Phosphorylase Kinase; domain 1 562 665 - -
Gma01g00185 940 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Gma01g00185 940 Gene3D - 195 345 - -
Gma01g00185 940 SUPERFAMILY L domain-like 374 491 - -
Gma01g00185 940 SMART serkin_6 590 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00185 940 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Gma01g00185 940 Gene3D Ribonuclease Inhibitor 358 499 IPR032675 -
Gma01g00185 940 PANTHER OS05G0525400 PROTEIN 82 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00185 Gma-Chr1 2038281 2045855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00185 9 890 Receptor kinase-like Gene Family AT1G67720 33.153 4.40e-126 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma01g00185 Malectin_like 2.1e-45 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00185 - - gmx:100781986 1784.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00185 01 2038281 2045855 Gma09g01877 09 44360762 44369093 GST